RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 ZNF783Q6ZMS7 281 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 TMIEQ8NEW7 156 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 KCNE4Q8WWG9 221 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 NTAN1Q96AB6 310 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 ARRDC3Q96B67 414 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 PPP1R16AQ96I34 528 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 MCEEQ96PE7 176 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 SPON2Q9BUD6 331 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 C2orf49Q9BVC5 232 aaPredicted RBP14.8□□□□□ -0.04
LETM1-207ENST00000512669 ABCG4Q9H172 646 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 TNKS2Q9H2K2 1166 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 HAUS4Q9H6D7 363 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 NOL6Q9H6R4 1146 aaKnown RBP14.8□□□□□ -0.04
LETM1-207ENST00000512669 PCDHB1Q9Y5F3 818 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 CFAP46Q8IYW2 2715 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 DOCK9Q9BZ29 2069 aa14.8□□□□□ -0.04
LETM1-207ENST00000512669 A0A1W2PQU0 124 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 TMCO5BA8MYB1 307 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 DDX3XO00571 662 aaKnown RBP eCLIP14.79□□□□□ -0.04
LETM1-207ENST00000512669 SLC31A1O15431 190 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 ATMINO43313 823 aaPredicted RBP14.79□□□□□ -0.04
LETM1-207ENST00000512669 RHOQP17081 205 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 CHRNA3P32297 505 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 PBX1P40424 430 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 PRKCIP41743 596 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 HNRNPKP61978 463 aaKnown RBP eCLIP14.79□□□□□ -0.04
LETM1-207ENST00000512669 MAMLD1Q13495 774 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 ARL13BQ3SXY8 428 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
LETM1-207ENST00000512669 DNAJC24Q6P3W2 148 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 C22orf39Q6P5X5 142 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 ARFGAP1Q8N6T3 406 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 SNRNP27Q8WVK2 155 aaKnown RBP14.79□□□□□ -0.04
LETM1-207ENST00000512669 ARHGEF2Q92974 986 aaKnown RBP14.79□□□□□ -0.04
LETM1-207ENST00000512669 CCDC97Q96F63 343 aaPredicted RBP14.79□□□□□ -0.04
LETM1-207ENST00000512669 CALN1Q9BXU9 219 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 ATP13A1Q9HD20 1204 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 TMEM248Q9NWD8 314 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 DNAI1Q9UI46 699 aa14.79□□□□□ -0.04
LETM1-207ENST00000512669 A6NNZ2 444 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 H3BM21 787 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 KPNA3O00505 521 aaPredicted RBP14.78□□□□□ -0.04
LETM1-207ENST00000512669 SCAMP1O15126 338 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 FFAR2O15552 330 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 USP12O75317 370 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 CSO75390 466 aaKnown RBP14.78□□□□□ -0.04
LETM1-207ENST00000512669 MPOP05164 745 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 SKILP12757 684 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 SERPINH1P50454 418 aaKnown RBP14.78□□□□□ -0.04
LETM1-207ENST00000512669 FANCCQ00597 558 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 ASIC2Q16515 512 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 ZNF284Q2VY69 593 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 FILIP1LQ4L180 1135 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 PLEKHA7Q6IQ23 1121 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 PCSK4Q6UW60 755 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 TMC6Q7Z403 805 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 ABI3BPQ7Z7G0 1075 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 SLFN11Q7Z7L1 901 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 OR13H1Q8NG92 308 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 TPCN2Q8NHX9 752 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 MAPK15Q8TD08 544 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 TBC1D31Q96DN5 1066 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 APOLD1Q96LR9 279 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 HDAC8Q9BY41 377 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 TRIM7Q9C029 511 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 KLC2Q9H0B6 622 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 UCKL1Q9NWZ5 548 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 FZD10Q9ULW2 581 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 CA5BQ9Y2D0 317 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 FCF1Q9Y324 198 aaKnown RBP14.78□□□□□ -0.04
LETM1-207ENST00000512669 HS3ST3A1Q9Y663 406 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 WASF2Q9Y6W5 498 aa14.78□□□□□ -0.04
LETM1-207ENST00000512669 TDRD6O60522 2096 aaKnown RBP14.77□□□□□ -0.04
LETM1-207ENST00000512669 DOCK4Q8N1I0 1966 aa14.77□□□□□ -0.04
LETM1-207ENST00000512669 SERPINC1P01008 464 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 CCDC172P0C7W6 258 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 PRLRP16471 622 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 L1CAMP32004 1257 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 RECQLP46063 649 aaPredicted RBP14.77□□□□□ -0.05
LETM1-207ENST00000512669 MAPKAPK2P49137 400 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 ARSIQ5FYB1 569 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 KIAA1161Q6NSJ0 714 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 ZCCHC8Q6NZY4 707 aaKnown RBP14.77□□□□□ -0.05
LETM1-207ENST00000512669 SCYL2Q6P3W7 929 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 KYAT3Q6YP21 454 aaKnown RBP14.77□□□□□ -0.05
LETM1-207ENST00000512669 LEKR1Q6ZMV7 388 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 ERN2Q76MJ5 926 aaKnown RBP14.77□□□□□ -0.05
LETM1-207ENST00000512669 VCPIP1Q96JH7 1222 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 MYOCQ99972 504 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 CNPY3Q9BT09 278 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 EDEM3Q9BZQ6 932 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 CSNK1G3Q9Y6M4 447 aa14.77□□□□□ -0.05
LETM1-207ENST00000512669 TRPM6Q9BX84 2022 aa14.76□□□□□ -0.05
LETM1-207ENST00000512669 TMEM191CA6NGB0 347 aa14.76□□□□□ -0.05
LETM1-207ENST00000512669 LEFTY1O75610 366 aa14.76□□□□□ -0.05
LETM1-207ENST00000512669 PCDH8O95206 1070 aa14.76□□□□□ -0.05
LETM1-207ENST00000512669 FTLP02792 175 aaPredicted RBP14.76□□□□□ -0.05
LETM1-207ENST00000512669 GIMD1P0DJR0 217 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms