RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 AFTPHQ6ULP2 937 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 NAT8LQ8N9F0 302 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 OR56A4Q8NGH8 313 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 MCOLN3Q8TDD5 553 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 RBBP8Q99708 897 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 MECRQ9BV79 373 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 BPIFA1Q9NP55 256 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 CNTN6Q9UQ52 1028 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 PLLPQ9Y342 182 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 H3BMM5 538 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 PCDH8O95206 1070 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 HALP42357 657 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 GNA12Q03113 381 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 WDTC1Q8N5D0 677 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 GLIS1Q8NBF1 620 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 B3GALT6Q96L58 329 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 SMOQ99835 787 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 MRPL57Q9BQC6 102 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 IL1RAPL1Q9NZN1 696 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 IGSF9Q9P2J2 1179 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 NR2E3Q9Y5X4 410 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 NR5A2O00482 541 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 ZNF623O75123 536 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 GPR32O75388 356 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 SEMA5AQ13591 1074 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 LPIN1Q14693 890 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 OR4L1Q8NH43 312 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 C2orf15Q8WU43 125 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 ZCCHC2Q9C0B9 1178 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 CAB39LQ9H9S4 337 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 POLG2Q9UHN1 485 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 ZNF180Q9UJW8 692 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 SORCS3Q9UPU3 1222 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 KIAA0100Q14667 2235 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 LAMA4Q16363 1823 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 TPST1O60507 370 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 KATNA1O75449 491 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 CREB1P16220 341 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 GRIA4P48058 902 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 DSG4Q86SJ6 1040 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 MAGEH1Q9H213 219 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 CD3EAPO15446 510 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 FSBPO95073 299 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 UNC5CO95185 931 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 NDST3O95803 873 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 FGBP02675 491 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 BPGMP07738 259 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 TBL3Q12788 808 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 NFYCQ13952 458 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 FBXL19Q6PCT2 694 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 GALNT4Q8N4A0 578 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 OR52K2Q8NGK3 314 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 NPY6RQ99463 290 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 CRTAC1Q9NQ79 661 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
PCDHA4-202ENST00000512229 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 RBM47A0AV96 593 aaKnown RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 HDAC3O15379 428 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 KDM1AO60341 852 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 TBX18O95935 607 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 CRHR1P34998 444 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 NDST2P52849 883 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 DSC2Q02487 901 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 SOX4Q06945 474 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 SFSWAPQ12872 951 aaKnown RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 ACOX1Q15067 660 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 QPCTQ16769 361 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 FUT11Q495W5 492 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 OR7D4Q8NG98 312 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 SUSD6Q92537 303 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 HGH1Q9BTY7 390 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 ARHGAP39Q9C0H5 1083 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC39A8Q9C0K1 460 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 CD248Q9HCU0 757 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 BAIAP3O94812 1187 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 FKBP9O95302 570 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 DGKAP23743 735 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 MAPKAPK2P49137 400 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 HSPA14Q0VDF9 509 aa13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 CAMK2GQ13555 558 aaPredicted RBP13.21□□□□□ -0.29
PCDHA4-202ENST00000512229 STARD3Q14849 445 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms