RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PDLIM1O00151 329 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 O00370 1275 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 DNALI1O14645 258 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 DLX3O60479 287 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SPAG6O75602 509 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 HEXIM1O94992 359 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CSTAP01040 98 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TP53P04637 393 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CLEC3BP05452 202 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 MYBL1P10243 752 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 FDPSP14324 419 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYP2A7P20853 494 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 AGXTP21549 392 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 HOXA6P31267 233 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CHRNA3P32297 505 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PCGF2P35227 344 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 GARSP41250 739 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTGER3P43115 390 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 FLT3LGP49771 235 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 METAP2P50579 478 aaKnown RBP eCLIP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 WNT7BP56706 349 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 RPS3AP61247 264 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAB1AP62820 205 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 HSPA14Q0VDF9 509 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 MYO1EQ12965 1108 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TSTA3Q13630 321 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TOB2Q14106 344 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 MOGQ16653 247 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 LRRC23Q53EV4 343 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCDC157Q569K6 752 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CLVS2Q5SYC1 327 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 WLSQ5T9L3 541 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CDCP2Q5VXM1 449 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TANGO2Q6ICL3 276 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CNKSR3Q6P9H4 555 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 KLHL17Q6TDP4 642 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 HTR3DQ70Z44 454 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM124AQ86V42 546 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZCCHC7Q8N3Z6 543 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 WDTC1Q8N5D0 677 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 FANCBQ8NB91 859 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 POGLUT1Q8NBL1 392 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR1N1Q8NGS0 311 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.11□□□□□ -1.593e-8■■■■■ 34.9
TRAPPC11-208ENST00000511955 SETD6Q8TBK2 473 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAET1EQ8TD07 263 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 LRRC8CQ8TDW0 803 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TNFRSF25Q93038 417 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 KIAA1143Q96AT1 154 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SNF8Q96H20 258 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM20AQ96MK3 541 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TSNARE1Q96NA8 513 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TUBGCP5Q96RT8 1024 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PIP5K1AQ99755 562 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 GSX2Q9BZM3 304 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC25A18Q9H1K4 315 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 LRRC19Q9H756 370 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC38A10Q9HBR0 1119 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 MAGEE1Q9HCI5 957 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 NUDT15Q9NV35 164 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SENP1Q9P0U3 644 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SEC63Q9UGP8 760 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PYCARDQ9ULZ3 195 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CAPN11Q9UMQ6 739 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 VPS9D1Q9Y2B5 631 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PCDHA8Q9Y5H6 950 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADGRA2Q96PE1 1338 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 NFIBO00712 420 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAD51BO15315 384 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TGM5O43548 720 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TRAPPC3O43617 180 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 NUDT21O43809 227 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMCC1O94876 653 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 ATE1O95260 518 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 NDST3O95803 873 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 MBD3O95983 291 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PDGFBP01127 241 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 LIPFP07098 398 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 ALOX5P09917 674 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SNHG28P0DPA3 235 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 BMP1P13497 986 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 BRAFP15056 766 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TGM1P22735 817 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TKTP29401 623 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 NOVP48745 357 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 FNTAP49354 379 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 NPEPPSP55786 919 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 PRAMEP78395 509 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 GUCY1A3Q02108 690 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TNFRSF17Q02223 184 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 SNX17Q15036 470 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 KARSQ15046 597 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 BCL2A1Q16548 175 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCL14Q16627 93 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 QRICH1Q2TAL8 776 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 ASPRV1Q53RT3 343 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 TOR2AQ5JU69 321 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 EFHC1Q5JVL4 640 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 C10orf120Q5SQS8 335 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms