RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-209	ENST00000511009	TXNDC8	Q6A555	127 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	NAA16	Q6N069	864 aa	Predicted RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	KRT74	Q7RTS7	529 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	PRPF39	Q86UA1	669 aa	Known RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	CHSY1	Q86X52	802 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	LURAP1L	Q8IV03	231 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	OSR1	Q8TAX0	266 aa	Predicted RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	PSPC1	Q8WXF1	523 aa	Known RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	C1orf74	Q96LT6	269 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	SIN3A	Q96ST3	1273 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	BAG1	Q99933	345 aa	Predicted RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	EFHD1	Q9BUP0	239 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	PCED1A	Q9H1Q7	454 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	KIF9	Q9HAQ2	790 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	ZNF304	Q9HCX3	659 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	SLC6A13	Q9NSD5	602 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	MRPL15	Q9P015	296 aa	Known RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	ADAM21	Q9UKJ8	722 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	CARD8	Q9Y2G2	431 aa		4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	AAR2	Q9Y312	384 aa	Known RBP	4.92	□□□□□ -1.62
MBD4-209	ENST00000511009	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009		A0A1W2PRQ8	180 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	SLC22A23	A1A5C7	686 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009		A8MV72	311 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	BTBD18	B2RXH4	712 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	FAM157A	C9JC47	383 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	CYR61	O00622	381 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ERAL1	O75616	437 aa	Known RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	TMCC1	O94876	653 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	TF	P02787	698 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	LCK	P06239	509 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	RB1	P06400	928 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	APOA4	P06727	396 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	CYP2A6	P11509	494 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	DPP6	P42658	865 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	PIP4K2A	P48426	406 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	LMAN1	P49257	510 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	MRPL12	P52815	198 aa	Known RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	YPEL5	P62699	121 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	PMPCA	Q10713	525 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	TMEM266	Q2M3C6	531 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ZSCAN23	Q3MJ62	389 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ALG10	Q5BKT4	473 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ALG10B	Q5I7T1	473 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	RAB41	Q5JT25	222 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	KIAA1755	Q5JYT7	1200 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	PRAMEF17	Q5VTA0	474 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ARMC3	Q5W041	872 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	AAGAB	Q6PD74	315 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	TBC1D26	Q86UD7	250 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	TDRP	Q86YL5	185 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	DPP10	Q8N608	796 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	HDAC7	Q8WUI4	952 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	TMEM170A	Q8WVE7	144 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	KAT2A	Q92830	837 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ATOH1	Q92858	354 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	MMAB	Q96EY8	250 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	SAT2	Q96F10	170 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	RADIL	Q96JH8	1075 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	KLK15	Q9H2R5	256 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	MOV10	Q9HCE1	1003 aa	Known RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	PDE7B	Q9NP56	450 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	ASAH2	Q9NR71	780 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	SERGEF	Q9UGK8	458 aa		4.91	□□□□□ -1.62
MBD4-209	ENST00000511009	FZD7	O75084	574 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	NDUFS3	O75489	264 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	PRR35	P0CG20	571 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	NR2F1	P10589	423 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	EDN2	P20800	178 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	CDA	P32320	146 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	UBA7	P41226	1012 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	F2RL1	P55085	397 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	HDAC4	P56524	1084 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	KLF10	Q13118	480 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	IRF3	Q14653	427 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	SYTL3	Q4VX76	610 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	BMP2KL	Q5H9B9	411 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	RASSF8	Q8NHQ8	419 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	LARP4B	Q92615	738 aa	Known RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	SARAF	Q96BY9	339 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	PGAM5	Q96HS1	289 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	CNDP2	Q96KP4	475 aa	Known RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	TEX12	Q9BXU0	123 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	IKZF4	Q9H2S9	585 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	MLXIPL	Q9NP71	852 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	MORF4L1	Q9UBU8	362 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	PACSIN3	Q9UKS6	424 aa		4.9	□□□□□ -1.63
MBD4-209	ENST00000511009	MST1R	Q04912	1400 aa		4.89	□□□□□ -1.63
MBD4-209	ENST00000511009		A0A096LPK6	155 aa		4.89	□□□□□ -1.63
MBD4-209	ENST00000511009		A0A1W2PQF6	199 aa		4.89	□□□□□ -1.63
MBD4-209	ENST00000511009	CBY3	A6NI87	242 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms