RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 TNRC6BQ9UPQ9 1833 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 DNAH14Q0VDD8 3507 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 A0A1B0GVT2 93 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TSPAN11A1L157 253 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 UPK3BL1B0FP48 263 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 UPK3BL2E5RIL1 263 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 VILLO15195 856 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 PJA2O43164 708 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 IGSF6O95976 241 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 WNT1P04628 370 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 UGT2B4P06133 528 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 SYPP08247 313 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TIMP2P16035 220 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 CR2P20023 1033 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 SERPINB6P35237 376 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 GJC1P36383 396 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 NUDT1P36639 197 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 ABL2P42684 1182 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 GRIA4P48058 902 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 AFF3P51826 1226 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 GRIK2Q13002 908 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 LBRQ14739 615 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF284Q2VY69 593 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TMEM259Q4ZIN3 620 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 C11orf63Q6NUN7 778 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 HORMAD1Q86X24 394 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 RHOT1Q8IXI2 618 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 PGBD5Q8N414 524 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 RYBPQ8N488 228 aaPredicted RBP11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TEX26Q8N6G2 289 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 SPC24Q8NBT2 197 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TPCN2Q8NHX9 752 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 SNX19Q92543 992 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 NUP205Q92621 2012 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 RAB7BQ96AH8 199 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF641Q96N77 438 aaPredicted RBP11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 KLHL32Q96NJ5 620 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TUBGCP5Q96RT8 1024 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 CALN1Q9BXU9 219 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 SP110Q9HB58 689 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 TMEM9BQ9NQ34 198 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 DYRK4Q9NR20 520 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 DMTF1Q9Y222 760 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 HYOU1Q9Y4L1 999 aa11.9□□□□□ -0.5
HMGXB3-203ENST00000510472 CACNA1EQ15878 2313 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 DCDC2BA2VCK2 349 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 TRAFD1O14545 582 aaPredicted RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 MFSD11O43934 449 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 RNGTTO60942 597 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 CTSKP43235 329 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 NOP2P46087 812 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 VAV2P52735 878 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 GBE1Q04446 702 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 RAD51Q06609 339 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 FGL2Q14314 439 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 GRM3Q14832 879 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 KIF19Q2TAC6 998 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 SEL1L3Q68CR1 1132 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 SLC9A4Q6AI14 798 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 FBXL19Q6PCT2 694 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 DBX2Q6ZNG2 339 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 SRLQ86TD4 932 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 PRPF39Q86UA1 669 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 ZSWIM9Q86XI8 627 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 MINDY1Q8N5J2 469 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 PLD5Q8N7P1 536 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 TMEM145Q8NBT3 493 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 ACRBPQ8NEB7 543 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 OR2I1PQ8NGU4 316 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 MAML1Q92585 1016 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 ECHDC3Q96DC8 303 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 EXOC2Q96KP1 924 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 SLC6A18Q96N87 628 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 MGME1Q9BQP7 344 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 C1QTNF2Q9BXJ5 285 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 GOLPH3Q9H4A6 298 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 SUV39H2Q9H5I1 410 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 DTLQ9NZJ0 730 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 ANKRD6Q9Y2G4 727 aa11.89□□□□□ -0.51
HMGXB3-203ENST00000510472 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 MATN3O15232 486 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 PSTPIP1O43586 416 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 TSPAN6O43657 245 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 PIGNO95427 931 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 CD59P13987 128 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 CCNCP24863 283 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 PI4KAP42356 2102 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 CDKN2BP42772 138 aa11.88□□□□□ -0.51
HMGXB3-203ENST00000510472 MAPK8P45983 427 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms