RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CD52P31358 61 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 PAPOLAP51003 745 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 MGAT3Q09327 533 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 HERC3Q15034 1050 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 PPM1LQ5SGD2 360 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 RANBP10Q6VN20 620 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 BNC2Q6ZN30 1099 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 PIWIL4Q7Z3Z4 852 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 MFSD6LQ8IWD5 586 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 RTL3Q8N8U3 475 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 MRGPRX2Q96LB1 330 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 UROC1Q96N76 676 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 TRAPPC9Q96Q05 1148 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 NDFIP2Q9NV92 336 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 FBXO5Q9UKT4 447 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 INPP5FQ9Y2H2 1132 aa18.13■□□□□ 0.49
CCHCR1-228ENST00000509552 TRPC5OSA6NMA1 111 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 E9PAM4 449 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 TAS2R39P59534 338 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 MED21Q13503 144 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 PDCD2Q16342 344 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 NEPROQ6NW34 567 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 KIAA0408Q6ZU52 694 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 SPATA6LQ8N4H0 392 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 GBP5Q96PP8 586 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 OMDQ99983 421 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 ATXN3LQ9H3M9 355 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 IPO11Q9UI26 975 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 ZCCHC18P0CG32 403 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 ATP5F1P24539 256 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 PEX2P28328 305 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 IRX1P78414 480 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 DLG1Q12959 904 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 SFT2D3Q587I9 215 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 CD300LGQ6UXG3 332 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 CALML6Q8TD86 181 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 IFT43Q96FT9 208 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 SERPINB11Q96P15 392 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 CDRT15Q96T59 188 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 ZNF385DQ9H6B1 395 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 CLIC5Q9NZA1 410 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 VPS28Q9UK41 221 aa18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 FNDC1Q4ZHG4 1894 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-228ENST00000509552 A0A0U1RQF3 1178 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 HEATR9A2RTY3 570 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 TNPO2O14787 897 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 CASQ2O14958 399 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 UQCRBP14927 111 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 CPB1P15086 417 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 THPOP40225 353 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 CHRNA4P43681 627 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 DNAJB13P59910 316 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 NSUN2Q08J23 767 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 ART3Q13508 389 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 PCSK7Q16549 785 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 FAM83EQ2M2I3 478 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 ARMC3Q5W041 872 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 AFMIDQ63HM1 303 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 HEXDCQ8WVB3 486 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 RCN3Q96D15 328 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 UNKQ9C0B0 810 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 POMKQ9H5K3 350 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 EFCAB1Q9HAE3 211 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 SPC25Q9HBM1 224 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 ZBTB26Q9HCK0 441 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 MPP6Q9NZW5 540 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 FNIP2Q9P278 1114 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 HS3ST4Q9Y661 456 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 H3BNX3 289 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 TNFRSF10BO14763 440 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 PEX1O43933 1283 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 MGEA5O60502 916 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 TADA2AO75478 443 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 YY1P25490 414 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 WNT3AP56704 352 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 SH2D4BQ5SQS7 431 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 TSTD2Q5T7W7 516 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 TMEM198Q66K66 360 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 SCD5Q86SK9 330 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 PGAM4Q8N0Y7 254 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 AFAP1L2Q8N4X5 818 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 KDM1BQ8NB78 822 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 CCDC126Q96EE4 140 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 SGF29Q96ES7 293 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 SUSD3Q96L08 255 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 DDX50Q9BQ39 737 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 FAM192AQ9GZU8 254 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 SLC25A51Q9H1U9 297 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 C6orf203Q9P0P8 240 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 PSMD13Q9UNM6 376 aa18.11■□□□□ 0.49
CCHCR1-228ENST00000509552 ENO4A6NNW6 628 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 KCNU1A8MYU2 1149 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 IGHA2P01877 340 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 TYMPP19971 482 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 NRG1Q02297 640 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 TRIM67Q6ZTA4 783 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 ICA1LQ8NDH6 482 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 TUBGCP5Q96RT8 1024 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 GTSE1Q9NYZ3 720 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms