RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 MTSS1LQ765P7 747 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MON1BQ7L1V2 547 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 OVCH1Q7RTY7 1134 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 GPRIN1Q7Z2K8 1008 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 TMEM150AQ86TG1 271 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 XYLT1Q86Y38 959 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 LRRC8AQ8IWT6 810 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZDHHC14Q8IZN3 488 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SPC24Q8NBT2 197 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 FNIP1Q8TF40 1166 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 RNF139Q8WU17 664 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CPA5Q8WXQ8 436 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PPM1EQ8WY54 764 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SEC14L1Q92503 715 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 FGF13Q92913 245 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PWWP2AQ96N64 755 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 EIF3CQ99613 913 aaKnown RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CHP1Q99653 195 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SELENOOQ9BVL4 669 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 FAM126AQ9BYI3 521 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 EPB41L1Q9H4G0 881 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF334Q9HCZ1 680 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PARVAQ9NVD7 372 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 UVRAGQ9P2Y5 699 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CYTH4Q9UIA0 394 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CDH7Q9ULB5 785 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 STAP1Q9ULZ2 295 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 NENFQ9UMX5 172 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF510Q9Y2H8 683 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 COQ6Q9Y2Z9 468 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PAXBP1Q9Y5B6 917 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 EPN1Q9Y6I3 576 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 REV3LO60673 3130 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PRUNE2Q8WUY3 3088 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 A0A087X0T9 212 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 YJEFN3A6XGL0 299 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 E7ENQ6 273 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CAPN9O14815 690 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 FFAR3O14843 346 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 TLR5O60602 858 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 ECI2O75521 394 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DAB1O75553 588 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 NDUFA10O95299 355 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 PTMAP06454 111 aaKnown RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 PLEKP08567 350 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 FAM228BP0C875 321 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC2A3P11169 496 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 KRT3P12035 628 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 LAMP2P13473 410 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 RARGP13631 454 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CPEP16870 476 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCR2P41597 374 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 MAGEA1P43355 309 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 NFKB2Q00653 900 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC9A5Q14940 896 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC5A9Q2M3M2 681 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CR1LQ2VPA4 569 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 GPR158Q5T848 1215 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 STEAP3Q658P3 488 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DNAJC24Q6P3W2 148 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DCUN1D2Q6PH85 259 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 MMS22LQ6ZRQ5 1243 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 FAM183BPQ6ZVS7 135 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 RSRC2Q7L4I2 434 aaKnown RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 BHLHA9Q7RTU4 235 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SCD5Q86SK9 330 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DCP2Q8IU60 420 aaKnown RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 TMEM139Q8IV31 216 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 RHOT2Q8IXI1 618 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CMTM8Q8IZV2 173 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CELF5Q8N6W0 485 aaKnown RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CHST14Q8NCH0 376 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 OLIG1Q8TAK6 271 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 ITFG1Q8TB96 612 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SH3RF2Q8TEC5 729 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DEPDC1BQ8WUY9 529 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 CTNNBL1Q8WYA6 563 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SMARCD2Q92925 531 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 NT5C3BQ969T7 300 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 AZIN2Q96A70 460 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 FAM149B1Q96BN6 582 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 PGAP3Q96FM1 320 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SERPINB11Q96P15 392 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC2A13Q96QE2 648 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 PPP1R9BQ96SB3 815 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 C11orf70Q9BRQ4 267 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DDX23Q9BUQ8 820 aaKnown RBP5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 DCLK3Q9C098 648 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 NACA2Q9H009 215 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SMOC2Q9H3U7 446 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 POMKQ9H5K3 350 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLITRK6Q9H5Y7 841 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZFP14Q9HCL3 533 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 TDP1Q9NUW8 608 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 HCFC1R1Q9NWW0 138 aa5.69□□□□□ -1.5
HMGB1P44-201ENST00000508597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms