RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MARCKSL1P49006 195 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 DHPSP49366 369 aaPredicted RBP9.26□□□□□ -0.93
NUP54-207ENST00000508583 PEX5P50542 639 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 BCL2L1Q07817 233 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 AP1B1Q10567 949 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
NUP54-207ENST00000508583 XRCC4Q13426 336 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 CYTH1Q15438 398 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 GDPD4Q6W3E5 623 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 LEKR1Q6ZMV7 388 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 ERN2Q76MJ5 926 aaKnown RBP9.26□□□□□ -0.93
NUP54-207ENST00000508583 CYP2U1Q7Z449 544 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 NDUFAF2Q8N183 169 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 TEX26Q8N6G2 289 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 OR14C36Q8NHC7 312 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 MAIP1Q8WWC4 291 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 MAML1Q92585 1016 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 OLFM3Q96PB7 478 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 NUDCD1Q96RS6 583 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 FRMD8P1Q9BZ68 369 aaPredicted RBP9.26□□□□□ -0.93
NUP54-207ENST00000508583 CARD9Q9H257 536 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 NEUROG2Q9H2A3 272 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 DKK3Q9UBP4 350 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 LHX3Q9UBR4 397 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 INVSQ9Y283 1065 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 JRKLQ9Y4A0 524 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 WASF2Q9Y6W5 498 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 THADAQ6YHU6 1953 aa9.26□□□□□ -0.93
NUP54-207ENST00000508583 PRR23AA6NEV1 266 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 NEMP1O14524 444 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 PLRG1O43660 514 aaKnown RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 AP1G1O43747 822 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 EPN2O95208 641 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 UGT2B4P06133 528 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 CTSLP07711 333 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ADRB3P13945 408 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 BCKDHBP21953 392 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 DRD3P35462 400 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 SCNN1BP51168 640 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 CCR5P51681 352 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ADPRHP54922 357 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 IFI35P80217 286 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 CREB5Q02930 508 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ITKQ08881 620 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 SLC10A7Q0GE19 358 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ATXN7L2Q5T6C5 722 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 KIAA1161Q6NSJ0 714 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ERAP2Q6P179 960 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 ARHGAP36Q6ZRI8 547 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 SRLQ86TD4 932 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 FAM124AQ86V42 546 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 SYT12Q8IV01 421 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 CDKL3Q8IVW4 592 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 AADATQ8N5Z0 425 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 SUMF1Q8NBK3 374 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 TSEN2Q8NCE0 465 aaKnown RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 CHST14Q8NCH0 376 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 OR6K2Q8NGY2 324 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 CEP76Q8TAP6 659 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ALG3Q92685 438 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 FAM131CQ96AQ9 280 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 SKA1Q96BD8 255 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 LRRC45Q96CN5 670 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ZNF419Q96HQ0 510 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 EXOC2Q96KP1 924 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 HSPA12BQ96MM6 686 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 PPP1R2P1Q96PQ5 205 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 GPR174Q9BXC1 333 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 C1QTNF7Q9BXJ2 289 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 HEMGNQ9BXL5 484 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 KCNF1Q9H3M0 494 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 RBM22Q9NW64 420 aaKnown RBP eCLIP9.25□□□□□ -0.93
NUP54-207ENST00000508583 EVLQ9UI08 416 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 MBD1Q9UIS9 605 aaPredicted RBP9.25□□□□□ -0.93
NUP54-207ENST00000508583 SARDHQ9UL12 918 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 TTLL3Q9Y4R7 772 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 FRYLO94915 3013 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 ABCA7Q8IZY2 2146 aa9.25□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3DA0A087WVF3 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3IA0A087WXS9 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3EA0A087X179 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3KA0A087X1G2 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 A0A0U1RQJ8 604 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3FA6NER0 549 aaPredicted RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 FAM47DPA6NHR8 397 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 C16orf96A6NNT2 1141 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 METTL12A8MUP2 240 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3LB9A6J9 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 H7C0C1 242 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 KCNK3O14649 394 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 INSIG1O15503 277 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 DDX3YO15523 660 aaKnown RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 TSPAN6O43657 245 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 GFRA3O60609 400 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 MAP3K6O95382 1288 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 PEX11BO96011 259 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms