RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZNF641Q96N77 438 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-209ENST00000508290 CHP1Q99653 195 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 ZNF670Q9BS34 389 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 ERVMER34-1Q9H9K5 563 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 EBF2Q9HAK2 575 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 LHX3Q9UBR4 397 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 IPO11Q9UI26 975 aaKnown RBP20.16■□□□□ 0.82
SFXN1-209ENST00000508290 FADS3Q9Y5Q0 445 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 ACTL7AQ9Y615 435 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 SLCO1B1Q9Y6L6 691 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 A0A1W2PR77 199 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 DFFAO00273 331 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 PALMO75781 387 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 UGT2B4P06133 528 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 KCNA4P22459 653 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 HNRNPA2B1P22626 353 aaKnown RBP20.15■□□□□ 0.82
SFXN1-209ENST00000508290 CDH6P55285 790 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 CYTH1Q15438 398 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 ZNF284Q2VY69 593 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 LEKR1Q6ZMV7 388 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 NAXDQ8IW45 347 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 CCDC170Q8IYT3 715 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 BBS5Q8N3I7 341 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 NPWQ8N729 165 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 OR6K2Q8NGY2 324 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 RFFLQ8WZ73 363 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 CINPQ9BW66 212 aaPredicted RBP20.15■□□□□ 0.82
SFXN1-209ENST00000508290 PACSIN1Q9BY11 444 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 HAUS2Q9NVX0 235 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 SEPT3Q9UH03 358 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 NUMA1Q14980 2115 aa20.15■□□□□ 0.82
SFXN1-209ENST00000508290 J3KR12 359 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 TLR4O00206 839 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 NEMP1O14524 444 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 TCF4P15884 667 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 ARRB1P49407 418 aaPredicted RBP20.14■□□□□ 0.81
SFXN1-209ENST00000508290 TMEM259Q4ZIN3 620 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 ATXN7L2Q5T6C5 722 aaPredicted RBP20.14■□□□□ 0.81
SFXN1-209ENST00000508290 BRAT1Q6PJG6 821 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 DBX2Q6ZNG2 339 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 VSIG1Q86XK7 387 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 TC2NQ8N9U0 490 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 TMEM145Q8NBT3 493 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 DEFB124Q8NES8 71 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 OR2I1PQ8NGU4 316 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 NSMCE1Q8WV22 266 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 KLHL32Q96NJ5 620 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 PSKH2Q96QS6 385 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 ELF4Q99607 663 aaPredicted RBP20.14■□□□□ 0.81
SFXN1-209ENST00000508290 SPTLC3Q9NUV7 552 aa20.14■□□□□ 0.81
SFXN1-209ENST00000508290 FNDC3AQ9Y2H6 1198 aaKnown RBP20.14■□□□□ 0.81
SFXN1-209ENST00000508290 A0A1W2PQ67 120 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 ZNF487B1APH4 448 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 MAT2AP31153 395 aaKnown RBP20.13■□□□□ 0.81
SFXN1-209ENST00000508290 SLC1A1P43005 524 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 ZNF75DP51815 510 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 NXPH1P58417 271 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 AP1S1P61966 158 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 ELP6Q0PNE2 266 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 CFAP58Q5T655 872 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 DCP2Q8IU60 420 aaKnown RBP20.13■□□□□ 0.81
SFXN1-209ENST00000508290 KCTD6Q8NC69 237 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 DENND6BQ8NEG7 585 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 SLC35G2Q8TBE7 412 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 CDC6Q99741 560 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 C1QTNF7Q9BXJ2 289 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 ATP13A3Q9H7F0 1226 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 PCDHB9Q9Y5E1 797 aa20.13■□□□□ 0.81
SFXN1-209ENST00000508290 A0A1B0GTQ1 180 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 TSPAN11A1L157 253 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 AREL1O15033 823 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 TRIM16O95361 564 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 XPAP23025 273 aaPredicted RBP20.12■□□□□ 0.81
SFXN1-209ENST00000508290 AMPD1P23109 780 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 SERPINA4P29622 427 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 GRK6P43250 576 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 ARSEP51690 589 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 SGCGQ13326 291 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 LBRQ14739 615 aaKnown RBP20.12■□□□□ 0.81
SFXN1-209ENST00000508290 RALGPS1Q5JS13 557 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 N4BP2L1Q5TBK1 243 aaPredicted RBP20.12■□□□□ 0.81
SFXN1-209ENST00000508290 LRRC38Q5VT99 294 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 TXNRD3NBQ6F5E7 133 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 GLRX5Q86SX6 157 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 TTC7BQ86TV6 843 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 ATPAF2Q8N5M1 289 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 CALR3Q96L12 384 aaKnown RBP20.12■□□□□ 0.81
SFXN1-209ENST00000508290 LENG8Q96PV6 779 aaPredicted RBP20.12■□□□□ 0.81
SFXN1-209ENST00000508290 PANX2Q96RD6 677 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 CALN1Q9BXU9 219 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 SLC17A9Q9BYT1 436 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 RBSNQ9H1K0 784 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 IL21RQ9HBE5 538 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 HS3ST3A1Q9Y663 406 aa20.12■□□□□ 0.81
SFXN1-209ENST00000508290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.11■□□□□ 0.81
SFXN1-209ENST00000508290 H0Y8X5 98 aa20.11■□□□□ 0.81
SFXN1-209ENST00000508290 RNF103O00237 685 aa20.11■□□□□ 0.81
SFXN1-209ENST00000508290 SH3BP5O60239 455 aa20.11■□□□□ 0.81
SFXN1-209ENST00000508290 LCA5LO95447 670 aa20.11■□□□□ 0.81
SFXN1-209ENST00000508290 WNT1P04628 370 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms