RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ATG4AQ8WYN0 398 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 SPATA13Q96N96 652 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 HHIPQ96QV1 700 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 SEMA3CQ99985 751 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 TMEM121Q9BTD3 319 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 AP1M1Q9BXS5 423 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 SLC25A51Q9H1U9 297 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 GLOD4Q9HC38 313 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 PRMT8Q9NR22 394 aaPredicted RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 PPM1HQ9ULR3 514 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 KPNA3O00505 521 aaPredicted RBP20.32■□□□□ 0.84
USP53-203ENST00000507597 SOCS5O75159 536 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 GCATO75600 419 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 LEFTY1O75610 366 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 ANXA9O76027 345 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 GAS8O95995 478 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 HLA-DQB2P05538 268 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 OXTRP30559 389 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 SLC8A1P32418 973 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 SUOXP51687 545 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 COPAP53621 1224 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 CSTF1Q05048 431 aaKnown RBP20.32■□□□□ 0.84
USP53-203ENST00000507597 WASHC5Q12768 1159 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 ZBTB17Q13105 803 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 USP39Q53GS9 565 aaKnown RBP20.32■□□□□ 0.84
USP53-203ENST00000507597 ANKRD20A2Q5SQ80 823 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 ANKRD20A1Q5TYW2 823 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 ANKRD20A3Q5VUR7 823 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 CCDC70Q6NSX1 233 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 NCEH1Q6PIU2 408 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 CCDC137Q6PK04 289 aaKnown RBP20.32■□□□□ 0.84
USP53-203ENST00000507597 USP30Q70CQ3 517 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 RASSF3Q86WH2 238 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 FAM71DQ8N9W8 422 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 MNS1Q8NEH6 495 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 LRRN4Q8WUT4 740 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 EXOC2Q96KP1 924 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 SPACA7Q96KW9 195 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 MRGPRX1Q96LB2 322 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 OMDQ99983 421 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 IRF2BPLQ9H1B7 796 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 MTG2Q9H4K7 406 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 SUV39H2Q9H5I1 410 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 USP29Q9HBJ7 922 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 PAK5Q9P286 719 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 RSPH14Q9UHP6 348 aa20.32■□□□□ 0.84
USP53-203ENST00000507597 AAR2Q9Y312 384 aaKnown RBP20.32■□□□□ 0.84
USP53-203ENST00000507597 NYNRINQ9P2P1 1898 aaKnown RBP20.32■□□□□ 0.84
USP53-203ENST00000507597 AXIN1O15169 862 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 PSMD3O43242 534 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 IFNB1P01574 187 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 C7P10643 843 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 GABRG2P18507 467 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 NDUFV2P19404 249 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 CR2P20023 1033 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 XPAP23025 273 aaPredicted RBP20.31■□□□□ 0.84
USP53-203ENST00000507597 COILP38432 576 aaPredicted RBP20.31■□□□□ 0.84
USP53-203ENST00000507597 PSMD8P48556 350 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 MAXP61244 160 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 RPS14P62263 151 aaKnown RBP20.31■□□□□ 0.84
USP53-203ENST00000507597 ZNF528Q3MIS6 628 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 ZNF805Q5CZA5 627 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 BRAT1Q6PJG6 821 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 B4GALNT4Q76KP1 1039 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 C11orf74Q86VG3 221 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 ZNF567Q8N184 647 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 CHST14Q8NCH0 376 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 GRIN3AQ8TCU5 1115 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 CCHCR1Q8TD31 782 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 RTP4Q96DX8 246 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 FCRL5Q96RD9 977 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 MKRN2Q9H000 416 aaKnown RBP20.31■□□□□ 0.84
USP53-203ENST00000507597 C11orf16Q9NQ32 467 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 VPS45Q9NRW7 570 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 ARIH1Q9Y4X5 557 aaPredicted RBP20.31■□□□□ 0.84
USP53-203ENST00000507597 MYO18AQ92614 2054 aaKnown RBP20.31■□□□□ 0.84
USP53-203ENST00000507597 VCANP13611 3396 aa20.31■□□□□ 0.84
USP53-203ENST00000507597 GALR2O43603 387 aaPredicted RBP20.3■□□□□ 0.84
USP53-203ENST00000507597 FDFT1P37268 417 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 GEMP55040 296 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 PARP6Q2NL67 630 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 LONP2Q86WA8 852 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 PGBD5Q8N414 524 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 CNTD1Q8N815 330 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 RAB7BQ96AH8 199 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 LRFN3Q9BTN0 628 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 GBA3Q9H227 469 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 PABPC3Q9H361 631 aaKnown RBP20.3■□□□□ 0.84
USP53-203ENST00000507597 NOD2Q9HC29 1040 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 CD248Q9HCU0 757 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 ITM2CQ9NQX7 267 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 DKK3Q9UBP4 350 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 FAM153AQ9UHL3 310 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 WASF2Q9Y6W5 498 aa20.3■□□□□ 0.84
USP53-203ENST00000507597 MUC22E2RYF6 1773 aaPredicted RBP20.29■□□□□ 0.84
USP53-203ENST00000507597 K7ESF4 209 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 SLC7A4O43246 635 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 ECEL1O95672 775 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 UGT2B4P06133 528 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 ITGB7P26010 798 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms