RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 A0A1W2PPE2 198 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 A0A1W2PR64 198 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 A0A1W2PRV1 198 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 A0A1W2PS29 197 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 LACTBL1A8MY62 500 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 H3BNC9 293 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MYO1FO00160 1098 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RASGRF2O14827 1237 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MPPED1O15442 326 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ASNA1O43681 348 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RHOBTB1O94844 696 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 SMC2O95347 1197 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MLYCDO95822 493 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 OLFM2O95897 454 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 FTCDO95954 541 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PAHP00439 452 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PLGP00747 810 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 IFNB1P01574 187 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ABCB1P08183 1280 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CELA2AP08217 269 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CNPP09543 421 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 FAM86B2P0C5J1 330 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ELFN1P0C7U0 828 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 FTH1P19P0C7X4 201 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 GHRP10912 638 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 UBL4AP11441 157 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 KRT3P12035 628 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 SRCP12931 536 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 NPPBP16860 134 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 WT1P19544 449 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 EN2P19622 333 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRKAR1BP31321 381 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RFC4P35249 363 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CASP3P42574 277 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 WASP42768 502 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CCR5P51681 352 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 HK3P52790 923 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MRPL12P52815 198 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 YPEL5P62699 121 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 YWHAZP63104 245 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRKCEQ02156 737 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RUNX1T1Q06455 604 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MGAT2Q10469 447 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 NOGQ13253 232 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 SGCGQ13326 291 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 NFIL3Q16649 462 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TRIM71Q2Q1W2 868 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TYSND1Q2T9J0 566 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MYLK3Q32MK0 819 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TWISTNBQ3B726 338 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CFAP221Q4G0U5 840 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 FBXO48Q5FWF7 155 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 KHDC1LQ5JSQ8 128 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ATAD3BQ5T9A4 648 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 C12orf60Q5U649 245 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CST9LP1Q5W188 147 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ZNF425Q6IV72 752 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TAF2Q6P1X5 1199 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 INO80CQ6PI98 192 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 SARM1Q6SZW1 724 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 GADL1Q6ZQY3 521 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 LINC00696Q6ZRV3 163 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RBM43Q6ZSC3 357 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 SEPT14Q6ZU15 432 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RABEPKQ7Z6M1 372 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RHPN2Q8IUC4 686 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ADGRF2Q8IZF7 708 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 C9orf106Q8NAJ2 232 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TDRD5Q8NAT2 981 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 MCUQ8NE86 351 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 OR6J1Q8NGC5 347 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 FAM76AQ8TAV0 307 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 URGCPQ8TCY9 931 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 NEK9Q8TD19 979 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 WDR60Q8WVS4 1066 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 KBTBD7Q8WVZ9 684 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRPF31Q8WWY3 499 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 LPIN2Q92539 896 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 LRRC46Q96FV0 321 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ART5Q96L15 291 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 DACH2Q96NX9 599 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PRAM1Q96QH2 718 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 GAL3ST4Q96RP7 486 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 ZPBPQ9BS86 351 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 KIFC3Q9BVG8 833 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TINAGL1Q9GZM7 467 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 NDST4Q9H3R1 872 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 TMEM51Q9NW97 253 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 PSD3Q9NYI0 1048 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 RGL1Q9NZL6 768 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 HMG20BQ9P0W2 317 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 LIMA1Q9UHB6 759 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CLEC4AQ9UMR7 237 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 SNX6Q9UNH7 406 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CDYLQ9Y232 598 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 CHTOPQ9Y3Y2 248 aaKnown RBP3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 LMTK3Q96Q04 1460 aa3.72□□□□□ -1.81
HMGB3P15-201ENST00000507326 DCAF1Q9Y4B6 1507 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms