RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 MEI4A8MW99 385 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 CDX4O14627 284 aaPredicted RBP20.14■□□□□ 0.81
SNX25-204ENST00000506896 CTNNA2P26232 953 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 HSPA9P38646 679 aaKnown RBP20.14■□□□□ 0.81
SNX25-204ENST00000506896 METAP1P53582 386 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 ADPRHP54922 357 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 COPS2P61201 443 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 CNTN1Q12860 1018 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 TRIM61Q5EBN2 209 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 TFDP3Q5H9I0 405 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 AGBL4Q5VU57 503 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 MFSD7Q6UXD7 560 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.14■□□□□ 0.81
SNX25-204ENST00000506896 SPOCD1Q6ZMY3 1216 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 ERN2Q76MJ5 926 aaKnown RBP20.14■□□□□ 0.81
SNX25-204ENST00000506896 PEX26Q7Z412 305 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 RFX6Q8HWS3 928 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 PLD5Q8N7P1 536 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 OR14C36Q8NHC7 312 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 CEP76Q8TAP6 659 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 DNASE2BQ8WZ79 361 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 KRT35Q92764 455 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 TSGA13Q96PP4 275 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 EDEM2Q9BV94 578 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 HAUS2Q9NVX0 235 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 DTLQ9NZJ0 730 aa20.14■□□□□ 0.81
SNX25-204ENST00000506896 ATXN2Q99700 1313 aaKnown RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 MIF4GDA9UHW6 222 aaKnown RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 PLRG1O43660 514 aaKnown RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 PEX11BO96011 259 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 CCNCP24863 283 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 MAPK8P45983 427 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 RWDD2BP57060 319 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 GBE1Q04446 702 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 ZNF235Q14590 738 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 DUOXA1Q1HG43 343 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 POM121L1PQ3SYA9 428 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 ZNF805Q5CZA5 627 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 MARC1Q5VT66 337 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 BZW1Q7L1Q6 419 aaKnown RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 NT5DC3Q86UY8 548 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 CCDC50Q8IVM0 306 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 TSEN2Q8NCE0 465 aaKnown RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 OR6K2Q8NGY2 324 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 HDAC11Q96DB2 347 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 TUBGCP5Q96RT8 1024 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 C6orf106Q9H6K1 298 aaPredicted RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 CAPN10Q9HC96 672 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 SUSD2Q9UGT4 822 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 AMFRQ9UKV5 643 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.13■□□□□ 0.81
SNX25-204ENST00000506896 PCDH15Q96QU1 1955 aa20.13■□□□□ 0.81
SNX25-204ENST00000506896 A0A0U1RQJ8 604 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 SERPINF2P08697 491 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 CETN2P41208 172 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 MARCKSL1P49006 195 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 NR2C2P49116 596 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 NEK3P51956 506 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 SLC10A7Q0GE19 358 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 HNRNPDQ14103 355 aaKnown RBP20.12■□□□□ 0.81
SNX25-204ENST00000506896 GSE1Q14687 1217 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 PDK1Q15118 436 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 PPP2R5EQ16537 467 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 PIP5KL1Q5T9C9 394 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 DCAF12L1Q5VU92 463 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 KIAA0895LQ68EN5 471 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 NCEH1Q6PIU2 408 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 GDPD4Q6W3E5 623 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 RGL4Q8IZJ4 473 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 ARRDC3Q96B67 414 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 EXOC2Q96KP1 924 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 NUSAP1Q9BXS6 441 aaKnown RBP20.12■□□□□ 0.81
SNX25-204ENST00000506896 BRD8Q9H0E9 1235 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 GUCA1BQ9UMX6 200 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 SLC6A14Q9UN76 642 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 HEY1Q9Y5J3 304 aa20.12■□□□□ 0.81
SNX25-204ENST00000506896 MED19A0JLT2 244 aaPredicted RBP20.11■□□□□ 0.81
SNX25-204ENST00000506896 FAM47DPA6NHR8 397 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 C4orf47A7E2U8 309 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 PPP1R12AO14974 1030 aaPredicted RBP20.11■□□□□ 0.81
SNX25-204ENST00000506896 MATN3O15232 486 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 UGT2B4P06133 528 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 GNSP15586 552 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 TGM2P21980 687 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 MAOBP27338 520 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 MMP13P45452 471 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 AP1S1P61966 158 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 SLC10A2Q12908 348 aaPredicted RBP20.11■□□□□ 0.81
SNX25-204ENST00000506896 RALGPS1Q5JS13 557 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 NEK5Q6P3R8 708 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 FBXL19Q6PCT2 694 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 SRLQ86TD4 932 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 TEX26Q8N6G2 289 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 HCAR2Q8TDS4 363 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 RAB7BQ96AH8 199 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 PDLIM2Q96JY6 352 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 ZNF641Q96N77 438 aaPredicted RBP20.11■□□□□ 0.81
SNX25-204ENST00000506896 PREBQ9HCU5 417 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 TMEM9BQ9NQ34 198 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms