RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CFAP69A5D8W1 941 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 C1QTNF3-AMACRE9PGA6 284 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 KRIT1O00522 736 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 MID1O15344 667 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 IL1BP01584 269 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 DNTTP04053 509 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 CD68P34810 354 aaPredicted RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 DRD3P35462 400 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 MAPK8P45983 427 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 PSMD8P48556 350 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 FNTBP49356 437 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 METAP1P53582 386 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 NIPAL4Q0D2K0 466 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 BYSLQ13895 437 aaKnown RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 IHHQ14623 411 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 CYP1B1Q16678 543 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 MAP7D1Q3KQU3 841 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 KIAA1324Q6UXG2 1013 aaKnown RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 GDPD4Q6W3E5 623 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 USP30Q70CQ3 517 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF567Q8N184 647 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 RYBPQ8N488 228 aaPredicted RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 AADATQ8N5Z0 425 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 C12orf50Q8NA57 414 aaPredicted RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 ZBTB44Q8NCP5 570 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 GRIN3AQ8TCU5 1115 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 HCAR2Q8TDS4 363 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 ARRDC3Q96B67 414 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 TADA1Q96BN2 335 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 RTP4Q96DX8 246 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF641Q96N77 438 aaPredicted RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 AGAP3Q96P47 875 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 TMEM121Q9BTD3 319 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 CEP41Q9BYV8 373 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 ZDHHC6Q9H6R6 413 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 NOD2Q9HC29 1040 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 CD93Q9NPY3 652 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 HOMER3Q9NSC5 361 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 ZSCAN32Q9NX65 697 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 SMARCAL1Q9NZC9 954 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 SEPT10Q9P0V9 454 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 TRHDEQ9UKU6 1024 aa13□□□□□ -0.33
TCOF1-210ENST00000506767 DRG1Q9Y295 367 aaKnown RBP13□□□□□ -0.33
TCOF1-210ENST00000506767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-210ENST00000506767 C5orf60A6NFR6 353 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-210ENST00000506767 TRAFD1O14545 582 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-210ENST00000506767 KCNN4O15554 427 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 LILRB5O75023 590 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF217O75362 1048 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ITGAVP06756 1048 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 MMP2P08253 660 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ACADMP11310 421 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ITGB7P26010 798 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 STIP1P31948 543 aaKnown RBP12.99□□□□□ -0.33
TCOF1-210ENST00000506767 P2RY2P41231 377 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 TPMTP51580 245 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 GDF10P55107 478 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 DSC2Q02487 901 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 TCF15Q12870 199 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF805Q5CZA5 627 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ANKRD20A2Q5SQ80 823 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ANKRD20A1Q5TYW2 823 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 KBTBD6Q86V97 674 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 CAMK1DQ8IU85 385 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ECHDC3Q96DC8 303 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 IMP4Q96G21 291 aaKnown RBP12.99□□□□□ -0.33
TCOF1-210ENST00000506767 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 SLC25A51Q9H1U9 297 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 SUV39H2Q9H5I1 410 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 GLOD4Q9HC38 313 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 SCUBE2Q9NQ36 999 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 DKK3Q9UBP4 350 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 RNF14Q9UBS8 474 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 SERGEFQ9UGK8 458 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 ANKRD36A6QL64 1941 aa12.99□□□□□ -0.33
TCOF1-210ENST00000506767 A0A1W2PP55 124 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 KPNA3O00505 521 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 HTRA2O43464 458 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 GCATO75600 419 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 NEBLO76041 1014 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 PIGNO95427 931 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 UGT2B4P06133 528 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 SKOR1P84550 965 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 ITKQ08881 620 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 SFSWAPQ12872 951 aaKnown RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 SNX1Q13596 522 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 SLC14A2Q15849 920 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 PRPF39Q86UA1 669 aaKnown RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 FRMD1Q8N878 549 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 RLN3Q8WXF3 142 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms