RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 RNF125Q96EQ8 232 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 APOPT1Q96IL0 206 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 PPM1MQ96MI6 270 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 NPFFR1Q9GZQ6 430 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 CATSPERBQ9H7T0 1116 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 SPATS2LQ9NUQ6 558 aaKnown RBP3.05□□□□□ -1.92
GYPB-207ENST00000506679 ANKRD10Q9NXR5 420 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 NCKIPSDQ9NZQ3 722 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 KIAA1456Q9P272 454 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 PEMTQ9UBM1 199 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 HSPB7Q9UBY9 170 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 CYP46A1Q9Y6A2 500 aa3.05□□□□□ -1.92
GYPB-207ENST00000506679 TRIP12Q14669 1992 aaPredicted RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 A0A0U1RQF3 1178 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 FAM90A8PA6NJQ4 464 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 A6NLC8 198 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 INSIG1O15503 277 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 TNFSF14O43557 240 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 CYP1A2P05177 515 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 HEXAP06865 529 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 FAM90A13PP0C7W8 464 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 FAM90A24PP0C7X0 464 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 XBP1P17861 261 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 SRD5A1P18405 259 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 ABCD3P28288 659 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 ENTPD1P49961 510 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 POLGP54098 1239 aaPredicted RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 YWHAZP63104 245 aaKnown RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 RPP30P78346 268 aaKnown RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 ABATP80404 500 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 TDGQ13569 410 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 LPIN1Q14693 890 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 DNTTIP2Q5QJE6 756 aaKnown RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 SERTAD4-AS1Q5TG53 156 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 OTUD1Q5VV17 481 aaPredicted RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 TXNDC8Q6A555 127 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 TMEM81Q6P7N7 255 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 ZNF549Q6P9A3 640 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 INO80CQ6PI98 192 aaPredicted RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 Q6ZTK2 550 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 H1FNTQ75WM6 255 aaPredicted RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 CHD1LQ86WJ1 897 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 PRR26Q8N8Z3 221 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 C11orf65Q8NCR3 313 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 NAXEQ8NCW5 288 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 GPT2Q8TD30 523 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 RNF183Q96D59 192 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 YME1L1Q96TA2 773 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 EIF2AK1Q9BQI3 630 aaKnown RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 WACQ9BTA9 647 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 DCLK3Q9C098 648 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 LHPPQ9H008 270 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 EBF3Q9H4W6 596 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 MRPL44Q9H9J2 332 aaKnown RBP3.04□□□□□ -1.92
GYPB-207ENST00000506679 SNTG1Q9NSN8 517 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 PLK2Q9NYY3 685 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 PCDHA7Q9UN72 937 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.04□□□□□ -1.92
GYPB-207ENST00000506679 PCDHGB5Q9Y5G0 923 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 INSL5Q9Y5Q6 135 aa3.04□□□□□ -1.92
GYPB-207ENST00000506679 KDM3AQ9Y4C1 1321 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 A0A1B0GVT2 93 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 HSPB2A8KAH6 182 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 KLRF2D3W0D1 207 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 CHL1O00533 1208 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 VWA5AO00534 786 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 TNPO2O14787 897 aaKnown RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 LDLRAD4O15165 306 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 SMAD6O43541 496 aaKnown RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 SLC25A17O43808 307 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 KLK8O60259 260 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 ALPLP05186 524 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 ITGAXP20702 1163 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 MYF6P23409 242 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 GGT5P36269 586 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 THBS3P49746 956 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 HTR6P50406 440 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 PMS2P54278 862 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 CLDN2P57739 230 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 UFM1P61960 85 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 POU5F1BQ06416 359 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 ST3GAL1Q11201 340 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 SHBQ15464 509 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 HSPB2Q16082 182 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 EDRF1Q3B7T1 1238 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 ACAD10Q6JQN1 1059 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 C8orf82Q6P1X6 216 aaPredicted RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 SLC22A25Q6T423 547 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 DLK2Q6UY11 383 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 TADA2BQ86TJ2 420 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 SAMD14Q8IZD0 417 aaPredicted RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 NFKBIDQ8NI38 313 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 OIT3Q8WWZ8 545 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 MIB2Q96AX9 1013 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 NR1H4Q96RI1 486 aaPredicted RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 GLIS2Q9BZE0 524 aaPredicted RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 PAIP1Q9H074 479 aaKnown RBP3.03□□□□□ -1.92
GYPB-207ENST00000506679 CDT1Q9H211 546 aa3.03□□□□□ -1.92
GYPB-207ENST00000506679 JMJD4Q9H9V9 463 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms