RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CTCFP49711 727 aaPredicted RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 DCAF7P61962 342 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 DCTN2Q13561 401 aaKnown RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 TBC1D9BQ66K14 1250 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 TADA2BQ86TJ2 420 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 FAM160B2Q86V87 743 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 HDAC7Q8WUI4 952 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 CENPIQ92674 756 aaPredicted RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 KLHL29Q96CT2 875 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 THSD1Q9NS62 852 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 SNTG1Q9NSN8 517 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 MPP6Q9NZW5 540 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 C11orf21Q9P2W6 132 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 KIDINS220Q9ULH0 1771 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 CCNB3Q8WWL7 1395 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 CDK13Q14004 1512 aaKnown RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 TRBV5-3A0A0A0MS03 114 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 TRBV5-7A0A0A0MS05 114 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 PGPEP1LA6NFU8 196 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 USO1O60763 962 aaKnown RBP6.29□□□□□ -1.4
HERC4-213ENST00000506515 HSPA1AP0DMV8 641 aaKnown RBP6.29□□□□□ -1.4
HERC4-213ENST00000506515 HSPA1BP0DMV9 641 aaKnown RBP6.29□□□□□ -1.4
HERC4-213ENST00000506515 ABCD1P33897 745 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 RGS2P41220 211 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 DPP6P42658 865 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 POLD2P49005 469 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 CLCNKBP51801 687 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 INHBEP58166 350 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 CYP4A11Q02928 519 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 GAD2Q05329 585 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 SRSF4Q08170 494 aaKnown RBP6.29□□□□□ -1.4
HERC4-213ENST00000506515 SMTNL2Q2TAL5 461 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 TRIM74Q86UV6 250 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 TRIM73Q86UV7 250 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 SLC25A41Q8N5S1 370 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 LRRC57Q8N9N7 239 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 ADAMTS15Q8TE58 950 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 ATOH1Q92858 354 aaPredicted RBP6.29□□□□□ -1.4
HERC4-213ENST00000506515 SAAL1Q96ER3 474 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 NR1H4Q96RI1 486 aaPredicted RBP6.29□□□□□ -1.4
HERC4-213ENST00000506515 CHCHD6Q9BRQ6 235 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 PRSS22Q9GZN4 317 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 SPAG4Q9NPE6 437 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 CTNNAL1Q9UBT7 734 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 HSPB7Q9UBY9 170 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 RAP2CQ9Y3L5 183 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 PCDHGB5Q9Y5G0 923 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 KDM5DQ9BY66 1539 aa6.29□□□□□ -1.4
HERC4-213ENST00000506515 DNMT1P26358 1616 aaKnown RBP6.28□□□□□ -1.4
HERC4-213ENST00000506515 ABCA6Q8N139 1617 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 KDM3AQ9Y4C1 1321 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 A0A1W2PPC1 479 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 FAM157AC9JC47 383 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 DDX58O95786 925 aaKnown RBP6.28□□□□□ -1.4
HERC4-213ENST00000506515 PRR35P0CG20 571 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 CHMP24386 653 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 YWHAQP27348 245 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 POU1F1P28069 291 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 BLKP51451 505 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 EIF5P55010 431 aaKnown RBP6.28□□□□□ -1.4
HERC4-213ENST00000506515 TMPRSS3P57727 454 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 C6orf10Q5SRN2 563 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 KDELC2Q7Z4H8 507 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 GPAT4Q86UL3 456 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 ANKRD13BQ86YJ7 626 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 RASSF8Q8NHQ8 419 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 BARD1Q99728 777 aaKnown RBP6.28□□□□□ -1.4
HERC4-213ENST00000506515 PNRC2Q9NPJ4 139 aaKnown RBP6.28□□□□□ -1.4
HERC4-213ENST00000506515 NRIP3Q9NQ35 241 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 C20orf141Q9NUB4 165 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 KIAA1456Q9P272 454 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 PTGFRNQ9P2B2 879 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 TBC1D14Q9P2M4 693 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 ABCC1P33527 1531 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 DEPDC5O75140 1603 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 MYO3AQ8NEV4 1616 aa6.28□□□□□ -1.4
HERC4-213ENST00000506515 UGGT1Q9NYU2 1555 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 CLTCQ00610 1675 aaKnown RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 CASKIN1Q8WXD9 1431 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 NPIPB15A6NHN6 443 aaPredicted RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 E5RJQ4 531 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 F5H0A9 414 aaPredicted RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 LDLRAD4O15165 306 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 RNMTO43148 476 aaKnown RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 CELA2AP08217 269 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 SPARCP09486 303 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 CHRNB1P11230 501 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 SLC2A4P14672 509 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 KELP23276 732 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 ARL1P40616 181 aaPredicted RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 YWHAZP63104 245 aaKnown RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 ERV3-1Q14264 604 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 TAF11Q15544 211 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 Q4G0T1 1027 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms