RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 HNRNPCP07910 306 aaKnown RBP eCLIP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 IRF1P10914 325 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 RARGP13631 454 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 MAKP20794 623 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 IDUAP35475 653 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 PTPN9P43378 593 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 BLKP51451 505 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 YWHAZP63104 245 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 RHAGQ02094 409 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 ABHD18Q0P651 414 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 FOXI1Q12951 378 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 STK4Q13043 487 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 AIMP2Q13155 320 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 TAF11Q15544 211 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 DPCR1Q3MIW9 517 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 PLK5Q496M5 336 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 C5orf22Q49AR2 442 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 FBXO43Q4G163 708 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARL13AQ5H913 290 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 MIIPQ5JXC2 388 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 VWA5B1Q5TIE3 1220 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 FNDC7Q5VTL7 733 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 TTI2Q6NXR4 508 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM154Q6P9G4 183 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 KLHL35Q6PF15 583 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF474Q6S9Z5 364 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 SARM1Q6SZW1 724 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 KRT74Q7RTS7 529 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 GSTA5Q7RTV2 222 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM160B2Q86V87 743 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 RFX6Q8HWS3 928 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 C17orf53Q8N3J3 647 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 PAQR4Q8N4S7 273 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 WDTC1Q8N5D0 677 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM47BQ8NA70 645 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 CADM4Q8NFZ8 388 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 OR52N4Q8NGI2 321 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 KAT2BQ92831 832 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 JAKMIP2Q96AA8 810 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 PERPQ96FX8 193 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 CMTM3Q96MX0 182 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 ASB2Q96Q27 587 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 MAP7D2Q96T17 732 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 IFT27Q9BW83 186 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 MAK16Q9BXY0 300 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 SH2D4AQ9H788 454 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 Q9N2J8 555 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 C20orf141Q9NUB4 165 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 KIAA1456Q9P272 454 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 CLDN16Q9Y5I7 305 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 ADGRB3O60242 1522 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLIT1O75093 1534 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 EFCAB6Q5THR3 1501 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 CROCC2H7BZ55 1655 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 SALL3Q9BXA9 1300 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 POC1B-GALNT4F8VUJ3 575 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 LDLRAD4O15165 306 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 MSI1O43347 362 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 USP12O75317 370 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF202O95125 648 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ADAP00813 363 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 DNTTP04053 509 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 TUBB4AP04350 444 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 POU1F1P28069 291 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 TACR3P29371 465 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 CHRNA5P30532 468 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ACSL1P33121 698 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 TTKP33981 857 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 NNMTP40261 264 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 PBX3P40426 434 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 GABRB2P47870 512 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 RARRES1P49788 294 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 CYP2J2P51589 502 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 SOX10P56693 466 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 IFI35P80217 286 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZBTB16Q05516 673 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 IDI1Q13907 227 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 BECN1Q14457 450 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 VEPH1Q14D04 833 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 SPATS1Q496A3 300 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 PLEKHS1Q5SXH7 462 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 TSTD2Q5T7W7 516 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 SERTAD4-AS1Q5TG53 156 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM171A1Q5VUB5 890 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 GPR139Q6DWJ6 353 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 MOB3CQ70IA8 216 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 GPAT4Q86UL3 456 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ADGRF2Q8IZF7 708 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM9BQ8IZU0 186 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM116Q8NCL8 245 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 CAGE1Q8TC20 777 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZFPM2Q8WW38 1151 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 IP6K1Q92551 441 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 PIGKQ92643 395 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 BBC3Q96PG8 261 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 TEFMQ96QE5 360 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 FRG2BQ96QU4 278 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 YME1L1Q96TA2 773 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 H2AFJQ9BTM1 129 aa3.41□□□□□ -1.86
TRAPPC11-205ENST00000506426 MXD3Q9BW11 206 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms