RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 HSPB7Q9UBY9 170 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 RPS10-NUDT3A0A1W2PQS6 291 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 TYW5A2RUC4 315 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 CBY3A6NI87 242 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 TNFRSF13BO14836 293 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 MMP3P08254 477 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 ARSBP15848 533 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 THPOP40225 353 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 CXCR3P49682 368 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 PMS2P54278 862 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 PTP4A2Q12974 167 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 TAF11Q15544 211 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 PLEKHO1Q53GL0 409 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 ATG9BQ674R7 924 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 NCAPH2Q6IBW4 605 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 CES5AQ6NT32 575 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 RRM2BQ7LG56 351 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 ZNF367Q7RTV3 350 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 TBC1D26Q86UD7 250 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 TEX45Q8NA69 505 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 C11orf65Q8NCR3 313 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 NFKBIDQ8NI38 313 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 RNF183Q96D59 192 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 APOLD1Q96LR9 279 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 GFM1Q96RP9 751 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 KRTAP17-1Q9BYP8 105 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 NUF2Q9BZD4 464 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 PLAC1Q9HBJ0 212 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 C20orf141Q9NUB4 165 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 SPATS2LQ9NUQ6 558 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 IRAK4Q9NWZ3 460 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 NCKIPSDQ9NZQ3 722 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 KCND2Q9NZV8 630 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 ZNF69Q9UC07 566 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 SARDHQ9UL12 918 aa4.25□□□□□ -1.73
TOPBP1-204ENST00000505804 CD8B2A6NJW9 211 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 KLRF2D3W0D1 207 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 IFNL4K9M1U5 179 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 LDB2O43679 373 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 SH3BP5O60239 455 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 ATP2C2O75185 946 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 WDHD1O75717 1129 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 MBD4O95243 580 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 BMP15O95972 392 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 CD4P01730 458 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 UBL4AP11441 157 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 PTPN2P17706 415 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 SRD5A1P18405 259 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 CD53P19397 219 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 TNFAIP3P21580 790 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 RYKP34925 604 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 ENTPD1P49961 510 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 EFNA5P52803 228 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 CLDN2P57739 230 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 ZP1P60852 638 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 DDX10Q13206 875 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 RUNX2Q13950 521 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 LPIN1Q14693 890 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 VEPH1Q14D04 833 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 PRAMEF19Q5SWL8 479 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 AWAT2Q6E213 333 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 Q6ZSV7 163 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 TECPR1Q7Z6L1 1165 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 TEX19Q8NA77 164 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 GPT2Q8TD30 523 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 ASB5Q8WWX0 329 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 RFFLQ8WZ73 363 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 CDT1Q9H211 546 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 KRCC1Q9NPI7 259 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 NDRG3Q9UGV2 375 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 INSL5Q9Y5Q6 135 aa4.24□□□□□ -1.73
TOPBP1-204ENST00000505804 A0A1B0GVT2 93 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 A0A1W2PPH5 198 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 A0A1W2PQM1 296 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 MYMKA6NI61 221 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 MS4A18H0YCH9 400 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 CHL1O00533 1208 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 EBAG9O00559 213 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 TNFSF14O43557 240 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 LIASO43766 372 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 RTN3O95197 1032 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 TOMM40O96008 361 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 LCATP04180 440 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 HEXAP06865 529 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 TFPIP10646 304 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 ZNF8P17098 575 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 SCP2P22307 547 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 POU1F1P28069 291 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 EPHA8P29322 1005 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 DCTDP32321 178 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 HARS2P49590 506 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 ZNF284Q2VY69 593 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 PALB2Q86YC2 1186 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 DENND6AQ8IWF6 608 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 KCNG4Q8TDN1 519 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms