RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 PSMD13Q9UNM6 376 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 PTPRDP23468 1912 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 AP1G1O43747 822 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 USP17L7P0C7H9 530 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 COL6A1P12109 1028 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TFEBP19484 476 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 GABRB3P28472 473 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 SERPINB5P36952 375 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 CXCR3P49682 368 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TRIP10Q15642 601 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 ARL13AQ5H913 290 aaPredicted RBP17.15■□□□□ 0.34
LIN54-204ENST00000505397 NAPEPLDQ6IQ20 393 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 C16orf89Q6UX73 402 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 CNTN4Q8IWV2 1026 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 HIPK4Q8NE63 616 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 MOCOSQ96EN8 888 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TSGA13Q96PP4 275 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TASP1Q9H6P5 420 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 CSNK1G1Q9HCP0 422 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TMEM30AQ9NV96 361 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 C6orf203Q9P0P8 240 aaPredicted RBP17.15■□□□□ 0.34
LIN54-204ENST00000505397 PRG3Q9Y2Y8 225 aaPredicted RBP17.15■□□□□ 0.34
LIN54-204ENST00000505397 GOLGA8QA0A0J9YX86 632 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 GOLGA8OA6NCC3 632 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 HHLA1C9JL84 531 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 GOLGA8NF8WBI6 632 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SLC35E2BP0CK96 405 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 COL6A2P12110 1019 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 NCAM1P13591 858 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 ZNF33AQ06730 810 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PRKAA1Q13131 559 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PM20D1Q6GTS8 502 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 LSMEM2Q8N112 164 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 CNTD1Q8N815 330 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 KYQ8NBH2 561 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 DBF4BQ8NFT6 615 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 AGR3Q8TD06 166 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SEPT8Q92599 483 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SPATA16Q9BXB7 569 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 DDIT4Q9NX09 232 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 VTI1BQ9UEU0 232 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 ZDHHC2Q9UIJ5 367 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 TLK1Q9UKI8 766 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PQBP1O60828 265 aaKnown RBP17.14■□□□□ 0.33
LIN54-204ENST00000505397 NBNO60934 754 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PIGNO95427 931 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 F9P00740 461 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 CCR10P46092 362 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 HERC3Q15034 1050 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 ZNF423Q2M1K9 1284 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PIGGQ5H8A4 983 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PPM1LQ5SGD2 360 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SDCCAG8Q86SQ7 713 aaPredicted RBP17.14■□□□□ 0.33
LIN54-204ENST00000505397 LINC00523Q86TU6 105 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SPATA2LQ8IUW3 424 aaPredicted RBP17.14■□□□□ 0.33
LIN54-204ENST00000505397 COLGALT2Q8IYK4 626 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 ST13P4Q8IZP2 240 aaPredicted RBP17.14■□□□□ 0.33
LIN54-204ENST00000505397 DSELQ8IZU8 1212 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 CENPLQ8N0S6 344 aaPredicted RBP17.14■□□□□ 0.33
LIN54-204ENST00000505397 SERPINI1Q99574 410 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 OR12D3Q9UGF7 316 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 LRFN2Q9ULH4 789 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
LIN54-204ENST00000505397 SLCO1B7G3V0H7 640 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 GOLGA8TH3BQL2 631 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 TMEM189-UBE2V1I3L0A0 370 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 PSMD3O43242 534 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 B4GALT3O60512 393 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 EPHA3P29320 983 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
LIN54-204ENST00000505397 POLD2P49005 469 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 NUDT2P50583 147 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 SLC12A1Q13621 1099 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 SETD3Q86TU7 594 aaPredicted RBP17.13■□□□□ 0.33
LIN54-204ENST00000505397 TMEM126BQ8IUX1 230 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 PQLC1Q8N2U9 271 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 GPR78Q96P69 363 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 TMEM209Q96SK2 561 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 EPAS1Q99814 870 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
LIN54-204ENST00000505397 PAK6Q9NQU5 681 aaPredicted RBP17.13■□□□□ 0.33
LIN54-204ENST00000505397 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
LIN54-204ENST00000505397 NLRC5Q86WI3 1866 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 AIM2O14862 343 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 LRIG2O94898 1065 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 JCHAINP01591 159 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 AHSGP02765 367 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 POLE2P56282 527 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 CNPY1Q3B7I2 92 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 FBXL19Q6PCT2 694 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 UGT2A3Q6UWM9 527 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 TMC7Q7Z402 723 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 FSTL5Q8N475 847 aaPredicted RBP17.13■□□□□ 0.33
LIN54-204ENST00000505397 RNF208Q9H0X6 261 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 TMLHEQ9NVH6 421 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 SNX10Q9Y5X0 201 aa17.13■□□□□ 0.33
LIN54-204ENST00000505397 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 TADA2AO75478 443 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms