RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PALMO75781 387 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 ITIH2P19823 946 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 XPAP23025 273 aaPredicted RBP14.45□□□□□ -0.1
HOXC9-202ENST00000504557 CDH6P55285 790 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 DPYSQ14117 519 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 SUZ12Q15022 739 aaKnown RBP14.45□□□□□ -0.1
HOXC9-202ENST00000504557 SLC18A3Q16572 532 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 ZNF284Q2VY69 593 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 TTC7BQ86TV6 843 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 ARHGAP12Q8IWW6 846 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 KLHDC7BQ96G42 594 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 FEM1CQ96JP0 617 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 ELF4Q99607 663 aaPredicted RBP14.45□□□□□ -0.1
HOXC9-202ENST00000504557 EIF3CQ99613 913 aaKnown RBP14.45□□□□□ -0.1
HOXC9-202ENST00000504557 DNAJC7Q99615 494 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 CHP1Q99653 195 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 ETNK2Q9NVF9 386 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 DONSONQ9NYP3 566 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 PCOLCE2Q9UKZ9 415 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 TPX2Q9ULW0 747 aaKnown RBP14.45□□□□□ -0.1
HOXC9-202ENST00000504557 DMTF1Q9Y222 760 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 FADS3Q9Y5Q0 445 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 PTPRBP23467 1997 aa14.45□□□□□ -0.1
HOXC9-202ENST00000504557 IGLON5A6NGN9 336 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 FLRT2O43155 660 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 PRAMEF11O60813 436 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 SDC3O75056 442 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 PAK4O96013 591 aaPredicted RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 ITGAVP06756 1048 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 H2AFZP0C0S5 128 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 ZNF883P0CG24 379 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 THEGLP0DJG4 465 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 HNRNPA2B1P22626 353 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 AKT2P31751 481 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 HNRNPH3P31942 346 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 NXPH1P58417 271 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 SEMG2Q02383 582 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 MMRN1Q13201 1228 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 ACAP1Q15027 740 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 HADHQ16836 314 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 ZNF423Q2M1K9 1284 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 BOLA3Q53S33 107 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 INO80DQ53TQ3 878 aaPredicted RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 CFAP58Q5T655 872 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 TMCO3Q6UWJ1 677 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 KDM7AQ6ZMT4 941 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 H2AFVQ71UI9 128 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 POLNQ7Z5Q5 900 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 PTAR1Q7Z6K3 402 aaPredicted RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 SPATS2Q86XZ4 545 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 PSTKQ8IV42 348 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 MFSD2AQ8NA29 543 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 TSEN2Q8NCE0 465 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 CASKIN2Q8WXE0 1202 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 CCDC42Q96M95 316 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 CSPG4P5Q96PW8 444 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 WRAP53Q9BUR4 548 aaKnown RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 CINPQ9BW66 212 aaPredicted RBP14.44□□□□□ -0.1
HOXC9-202ENST00000504557 OSBPL1AQ9BXW6 950 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 CAAP1Q9H8G2 361 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 PDFQ9HBH1 243 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 PCDH18Q9HCL0 1135 aa14.44□□□□□ -0.1
HOXC9-202ENST00000504557 A0A1B0GTQ1 180 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 TTC24A2A3L6 582 aaPredicted RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 C10orf142B7Z368 130 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 PRKCGP05129 697 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 CD48P09326 243 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 FTH1P19P0C7X4 201 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 NUDT1P36639 197 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 RGRP47804 291 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 ARRB1P49407 418 aaPredicted RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 RPS21P63220 83 aaKnown RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 SLC25A11Q02978 314 aaKnown RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 BNIP3Q12983 259 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 SGCGQ13326 291 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 FGL2Q14314 439 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 MESDQ14696 234 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 DPYSL2Q16555 572 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 ATP13A4Q4VNC1 1196 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 NEK5Q6P3R8 708 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 PLPP6Q8IY26 295 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 CHCHD4Q8N4Q1 142 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 NIPA2Q8N8Q9 360 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 OR13H1Q8NG92 308 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 LRIG1Q96JA1 1093 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 SCNM1Q9BWG6 230 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 SLC17A9Q9BYT1 436 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 NHEJ1Q9H9Q4 299 aaPredicted RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 IPO11Q9UI26 975 aaKnown RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 NENFQ9UMX5 172 aa14.43□□□□□ -0.1
HOXC9-202ENST00000504557 GOLGA4Q13439 2230 aaKnown RBP14.43□□□□□ -0.1
HOXC9-202ENST00000504557 ARID1BQ8NFD5 2236 aaPredicted RBP14.42□□□□□ -0.1
HOXC9-202ENST00000504557 CXorf51AA0A1B0GTR3 108 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 AKR1B15C9JRZ8 316 aaPredicted RBP14.42□□□□□ -0.1
HOXC9-202ENST00000504557 RAD51BO15315 384 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 DFNA5O60443 496 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 MMP20O60882 483 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 MAP3K6O95382 1288 aa14.42□□□□□ -0.1
HOXC9-202ENST00000504557 ATXN1LP0C7T5 689 aaKnown RBP14.42□□□□□ -0.1
HOXC9-202ENST00000504557 TNNT1P13805 278 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms