RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TSR3Q9UJK0 312 aaKnown RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF229Q9UJW7 825 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 SLC8A2Q9UPR5 921 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 FADS3Q9Y5Q0 445 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 GPC6Q9Y625 555 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF831Q5JPB2 1677 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 H0YCG3 227 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 DLX3O60479 287 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 STBD1O95210 358 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ATG7O95352 703 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 VTNP04004 478 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 TSHRP16473 764 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 BDNFP23560 247 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ARL1P40616 181 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 NR4A2P43354 598 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 HSPA13P48723 471 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 GMPSP49915 693 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 BACE1P56817 501 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 TNK2Q07912 1038 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 NIPAL4Q0D2K0 466 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 DGCR6Q14129 220 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 POLD3Q15054 466 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 PDK2Q15119 407 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 CYP51A1Q16850 503 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF829Q3KNS6 432 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ANKRD34AQ69YU3 496 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 JADE1Q6IE81 842 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 CNSTQ6PJW8 725 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 BRSK2Q8IWQ3 736 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 DCBLD1Q8N8Z6 715 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 C1orf127Q8N9H9 656 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 SHCBP1Q8NEM2 672 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 OR6B3Q8NGW1 331 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ZC3H15Q8WU90 426 aaKnown RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ITCHQ96J02 903 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF597Q96LX8 424 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF518BQ9C0D4 1074 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 DRC3Q9H069 523 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 UPF3AQ9H1J1 476 aaKnown RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 CXCL16Q9H2A7 254 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 POMKQ9H5K3 350 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 DHX33Q9H6R0 707 aaKnown RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 PLK2Q9NYY3 685 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 SIX4Q9UIU6 781 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 PCDHGC3Q9UN70 934 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 CSADQ9Y600 493 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 PPP6CO00743 305 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 RSL1D1O76021 490 aaKnown RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 LYPLA2O95372 231 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 PRDX6P30041 224 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 OPRL1P41146 370 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 IST1P53990 364 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 C1QTNF8P60827 252 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 RHDQ02161 417 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 LAMTOR4Q0VGL1 99 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 MERTKQ12866 999 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 KCNMB4Q86W47 210 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 NUDT8Q8WV74 236 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 PBXIP1Q96AQ6 731 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 SDCCAG3Q96C92 435 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 CSPG4P5Q96PW8 444 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 KCTD15Q96SI1 283 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-208ENST00000504387 EFHD1Q9BUP0 239 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 MRIQ9BWK5 157 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 VANGL2Q9ULK5 521 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 RAP2CQ9Y3L5 183 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 SBF2Q86WG5 1849 aa7.7□□□□□ -1.18
NEDD9-208ENST00000504387 LACTBL1A8MY62 500 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 AURKAO14965 403 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 UBDO15205 165 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 HOXC6P09630 235 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 MYL4P12829 197 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 PGAM1P18669 254 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CCNA2P20248 432 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 KCNA5P22460 613 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 IDUAP35475 653 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SLC13A2Q13183 592 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 HSDL1Q3SXM5 330 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 NHSL2Q5HYW2 709 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 PAGE2BQ5JRK9 111 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ATF7IP2Q5U623 682 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 EFCAB12Q6NXP0 572 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ABHD15Q6UXT9 468 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 DEFB132Q7Z7B7 95 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 WDR49Q8IV35 697 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 FBXO16Q8IX29 292 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF567Q8N184 647 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 GFM2Q969S9 779 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ACDQ96AP0 544 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 GPRASP2Q96D09 838 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 HPDLQ96IR7 371 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ELMO2Q96JJ3 720 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CCDC138Q96M89 665 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SPATA33Q96N06 139 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 IL12RB2Q99665 862 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 BEGAINQ9BUH8 593 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 PORCNQ9H237 461 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 OXSMQ9NWU1 459 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 KLQ9UEF7 1012 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms