RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 A0A0U1RQS6 177 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM187AA6NFU0 413 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM47DPA6NHR8 397 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 H3BSA7 217 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 GPR171O14626 319 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 RRP8O43159 456 aaKnown RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 MSI1O43347 362 aaKnown RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 CST8O60676 142 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ATP5HO75947 161 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ATP5BP06576 529 aaKnown RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 THRAP10827 490 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 RALAP11233 206 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 MAGEA4P43358 317 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ALDH3B2P48448 385 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 TMED10P49755 219 aaKnown RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 EVX2Q03828 476 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 TFDP2Q14188 446 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ADGRE1Q14246 886 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 MAPK6Q16659 721 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 SMU1Q2TAY7 513 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 UMODL1Q5DID0 1318 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 SGO1Q5FBB7 561 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 FSCBQ5H9T9 825 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 DACT2Q5SW24 774 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 NBPF12Q5TAG4 269 aaPredicted RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 COL13A1Q5TAT6 717 aaPredicted RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 KDM4DQ6B0I6 523 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 KIAA1841Q6NSI8 718 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 DSG4Q86SJ6 1040 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 PRPF39Q86UA1 669 aaKnown RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 SGMS1Q86VZ5 419 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 GALNT12Q8IXK2 581 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ABI1Q8IZP0 508 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 CLIP4Q8N3C7 705 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 TRPM4Q8TD43 1214 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 PHIPQ8WWQ0 1821 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 FBXW5Q969U6 566 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ULK4Q96C45 1275 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC10A4Q96EP9 437 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF486Q96H40 463 aaPredicted RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 HS6ST2Q96MM7 605 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 MCEEQ96PE7 176 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 EGFL8Q99944 293 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 APOL2Q9BQE5 337 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 MROQ9BYG7 248 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 OSBPL8Q9BZF1 889 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 PAIP1Q9H074 479 aaKnown RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 C17orf75Q9HAS0 396 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 PRDM5Q9NQX1 630 aaPredicted RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM49BQ9NUQ9 324 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 RBAKQ9NYW8 714 aaPredicted RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 KANSL3Q9P2N6 904 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 EVLQ9UI08 416 aaPredicted RBP3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 DNMT3LQ9UJW3 386 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 SNX7Q9UNH6 387 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC22A7Q9Y694 548 aa3.72□□□□□ -1.81
PCDH11X-208ENST00000504220 ARID1BQ8NFD5 2236 aaPredicted RBP3.71□□□□□ -1.81
PCDH11X-208ENST00000504220 SMIM31A0A1B0GVY4 71 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 GLTPD2A6NH11 291 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 LEUTXA8MZ59 168 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 H0YCG3 227 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 NFIBO00712 420 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 E2F3O00716 465 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 WNT10BO00744 389 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 PJA2O43164 708 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 MED7O43513 233 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 ULK1O75385 1050 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 CELF2O95319 508 aaKnown RBP3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 AGTP01019 485 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 ALOX5P09917 674 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 GFAPP14136 432 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 CD46P15529 392 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 PDGFRAP16234 1089 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 GARTP22102 1010 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 EPHB2P29323 1055 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 ATP5C1P36542 298 aaKnown RBP3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 ATP6V1E1P36543 226 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 GRIA3P42263 894 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 RPP38P78345 283 aaKnown RBP3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 IFI35P80217 286 aaPredicted RBP3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 TARDBPQ13148 414 aaKnown RBP eCLIP3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 MOGSQ13724 837 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 NAB2Q15742 525 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 DCAF4L1Q3SXM0 396 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 VWA5B1Q5TIE3 1220 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 UBE2UQ5VVX9 321 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM160B1Q5W0V3 765 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 POTEHQ6S545 545 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 RIPOR1Q6ZS17 1223 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 CYP2U1Q7Z449 544 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 PDSS2Q86YH6 399 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 CLEC4FQ8N1N0 589 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 POU5F2Q8N7G0 328 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM71DQ8N9W8 422 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 DDHD1Q8NEL9 900 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 OR2T3Q8NH03 318 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 MTMR8Q96EF0 704 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 OTUD5Q96G74 571 aa3.71□□□□□ -1.82
PCDH11X-208ENST00000504220 EXOC2Q96KP1 924 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms