RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TAF1BQ53T94 588 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MROH9Q5TGP6 573 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 WSCD1Q658N2 575 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TAF2Q6P1X5 1199 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TMC5Q6UXY8 1006 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 CCDC81Q6ZN84 652 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 DET1Q7L5Y6 550 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 VASH1Q7L8A9 365 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 OTOAQ7RTW8 1153 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 CDH24Q86UP0 819 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MAPKAPK5Q8IW41 473 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ZCCHC9Q8N567 271 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ST13P5Q8NFI4 369 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ZFP28Q8NHY6 868 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PMM1Q92871 262 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MENTQ9BUN1 341 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 RSPH9Q9H1X1 276 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TNKS2Q9H2K2 1166 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TPK1Q9H3S4 243 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SMARCAD1Q9H4L7 1026 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 RMND5AQ9H871 391 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 CXorf21Q9HAI6 301 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 RIC8BQ9NVN3 520 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PIM2Q9P1W9 311 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TXNDC16Q9P2K2 825 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TRMT112Q9UI30 125 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 A0A0G2JND7 137 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MED24O75448 989 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SERPINI2O75830 405 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SUPT7LO94864 414 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 CBX6O95503 412 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 IFNA16P05015 189 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 KRT10P13645 584 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ATF6P18850 670 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 WARSP23381 471 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MAGEA4P43358 317 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ALDH18A1P54886 795 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 NME5P56597 212 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 COASYQ13057 564 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 COG2Q14746 738 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 CYTH1Q15438 398 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TGFBIQ15582 683 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ZBTB37Q5TC79 503 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 RANBP10Q6VN20 620 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SLC30A10Q6XR72 485 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MTDHQ86UE4 582 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 LDHDQ86WU2 507 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PAF1Q8N7H5 531 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TRPV1Q8NER1 839 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PIWIL2Q8TC59 973 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MGARPQ8TDB4 240 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ACTRT2Q8TDY3 377 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PHKBQ93100 1093 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PBXIP1Q96AQ6 731 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 RILPQ96NA2 401 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 LSM14BQ9BX40 385 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 C6orf62Q9GZU0 229 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MUC13Q9H3R2 512 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MANSC1Q9H8J5 431 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SP140LQ9H930 580 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TM9SF3Q9HD45 589 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 NKX1-2Q9UD57 310 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 TNRC6AQ8NDV7 1962 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SDK1Q7Z5N4 2213 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 EVPLQ92817 2033 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 hCG_2014768A0A024R1R8 64 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SMCO2A6NFE2 343 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ZBBXA8MT70 800 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 UPK3BL1B0FP48 263 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 HNRNPCL2B2RXH8 293 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 UPK3BL2E5RIL1 263 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 COPEO14579 308 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 KATNA1O75449 491 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ALX3O95076 343 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ACSL3O95573 720 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ANXA1P04083 346 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 APOA4P06727 396 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 GSTM1P09488 218 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 POLR2MP0CAP2 368 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MYBL1P10243 752 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 RALBP11234 206 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ERP29P30040 261 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 GRK3P35626 688 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SLCO1A2P46721 670 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 KPNA1P52294 538 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PMS1P54277 932 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 FMO1Q01740 532 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 MVKQ03426 396 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 KCNC4Q03721 635 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 NR5A1Q13285 461 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SNAPC2Q13487 334 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PDE1CQ14123 709 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ANGPT1Q15389 498 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 DLGAP5Q15398 846 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 IFIT1BQ5T764 474 aaKnown RBP2.82□□□□□ -1.96
NEDD4-204ENST00000503468 SLC2A7Q6PXP3 512 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 LUZP2Q86TE4 346 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 FAM126BQ8IXS8 530 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 THNSL1Q8IYQ7 743 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 CARNMT1Q8N4J0 409 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms