RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 NDFIP2Q9NV92 336 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 APOBEC3BQ9UH17 382 aaKnown RBP12.87□□□□□ -0.35
LMNA-218ENST00000502357 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
LMNA-218ENST00000502357 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 D6RAR5 112 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 NVLO15381 856 aaKnown RBP12.86□□□□□ -0.35
LMNA-218ENST00000502357 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 ITIH2P19823 946 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 CCKBRP32239 447 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 ETV5P41161 510 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 CCL7P80098 99 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 ZFP36L1Q07352 338 aaKnown RBP12.86□□□□□ -0.35
LMNA-218ENST00000502357 SLC20A2Q08357 652 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 SPIDRQ14159 915 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 TBR1Q16650 682 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 TRIM65Q6PJ69 517 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 KYQ8NBH2 561 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
LMNA-218ENST00000502357 SHC3Q92529 594 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 ISG20Q96AZ6 181 aaKnown RBP12.86□□□□□ -0.35
LMNA-218ENST00000502357 TBCBQ99426 244 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
LMNA-218ENST00000502357 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
LMNA-218ENST00000502357 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
LMNA-218ENST00000502357 SLC9A1P19634 815 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 OR1E1P30953 314 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 CLCN1P35523 988 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 ACVRL1P37023 503 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 YPEL5P62699 121 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 CETN1Q12798 172 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 EIF3IQ13347 325 aaKnown RBP12.85□□□□□ -0.35
LMNA-218ENST00000502357 CLCA4Q14CN2 919 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 RAB6CQ53S08 254 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 ZNF805Q5CZA5 627 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 MANEALQ5VSG8 457 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 MACC1Q6ZN28 852 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 ATG14Q6ZNE5 492 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 ARL10Q8N8L6 244 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 RAB7BQ96AH8 199 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 CCDC74AQ96AQ1 378 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 FAM117AQ9C073 453 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 RAB6CQ9H0N0 254 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 HECAQ9UBI9 543 aaPredicted RBP12.85□□□□□ -0.35
LMNA-218ENST00000502357 IPO11Q9UI26 975 aaKnown RBP12.85□□□□□ -0.35
LMNA-218ENST00000502357 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 SDK2Q58EX2 2172 aa12.85□□□□□ -0.35
LMNA-218ENST00000502357 ARHGEF17Q96PE2 2063 aaPredicted RBP12.84□□□□□ -0.35
LMNA-218ENST00000502357 C9orf172C9J069 976 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 TOR1BO14657 336 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 PSMA7O14818 248 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 GJB6O95452 261 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 ANXA6P08133 673 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 LIPCP11150 499 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 ITIH1P19827 911 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
LMNA-218ENST00000502357 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
LMNA-218ENST00000502357 GABRB2P47870 512 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 RPIAP49247 311 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 ARSDP51689 593 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 GNA12Q03113 381 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 SGCGQ13326 291 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 ALG11Q2TAA5 492 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 RETSATQ6NUM9 610 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 LVRNQ6Q4G3 990 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 ENOSF1Q7L5Y1 443 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 NLRP14Q86W24 1093 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 HSCBQ8IWL3 235 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 SDR16C5Q8N3Y7 309 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 GPR156Q8NFN8 814 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 OR6K2Q8NGY2 324 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 PCDH19Q8TAB3 1148 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 ARHGEF2Q92974 986 aaKnown RBP12.84□□□□□ -0.35
LMNA-218ENST00000502357 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
LMNA-218ENST00000502357 MAGEB5Q9BZ81 275 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 TM6SF2Q9BZW4 377 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 EPB41L5Q9HCM4 733 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 SIX2Q9NPC8 291 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.84□□□□□ -0.35
LMNA-218ENST00000502357 FOXJ2Q9P0K8 574 aa12.84□□□□□ -0.35
LMNA-218ENST00000502357 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
LMNA-218ENST00000502357 NBASA2RRP1 2371 aa12.83□□□□□ -0.36
LMNA-218ENST00000502357 PRAMEF33A0A0G2JMD5 474 aa12.83□□□□□ -0.36
LMNA-218ENST00000502357 PRAMEF10O60809 474 aa12.83□□□□□ -0.36
LMNA-218ENST00000502357 MMP20O60882 483 aa12.83□□□□□ -0.36
LMNA-218ENST00000502357 RPLP0P05388 317 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms