RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GOLPH3LQ9H4A5 285 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 FOXJ2Q9P0K8 574 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 GPR34Q9UPC5 381 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 TBC1D30Q9Y2I9 924 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 FCF1Q9Y324 198 aaKnown RBP9.28□□□□□ -0.92
CCDC171-209ENST00000498725 PCDHB11Q9Y5F2 797 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 PCDHGA7Q9Y5G6 932 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 UNC13CQ8NB66 2214 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 C16orf96A6NNT2 1141 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 KRIT1O00522 736 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 MED7O43513 233 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 MMP20O60882 483 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 SRGAP2O75044 1071 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF821O75541 412 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ITIH2P19823 946 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 GNA15P30679 374 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 OR1E1P30953 314 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 RNASE9P60153 205 aaKnown RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 PFN3P60673 137 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 FKBP3Q00688 224 aaKnown RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 PPARDQ03181 441 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 PDCLQ13371 301 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 EIF4EBP2Q13542 120 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 CARD16Q5EG05 197 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 PHF19Q5T6S3 580 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ATL3Q6DD88 541 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ISM2Q6H9L7 571 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 FAM183BPQ6ZVS7 135 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 TMEM110Q86TL2 294 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 DRC7Q8IY82 874 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 DCAF4L2Q8NA75 395 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF606Q8WXB4 792 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 TMEM74Q96NL1 305 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 LENG8Q96PV6 779 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 CPXM1Q96SM3 734 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 SEMA3CQ99985 751 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 FUCA2Q9BTY2 467 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 WRAP53Q9BUR4 548 aaKnown RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 TKTL2Q9H0I9 626 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 LRRN3Q9H3W5 708 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ATP13A1Q9HD20 1204 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 ANLNQ9NQW6 1124 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 MBNL1Q9NR56 388 aaKnown RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 PIGVQ9NUD9 493 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 HECAQ9UBI9 543 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-209ENST00000498725 COQ6Q9Y2Z9 468 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 SDK2Q58EX2 2172 aa9.27□□□□□ -0.93
CCDC171-209ENST00000498725 SPTA1P02549 2419 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 BLACEA4D250 179 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 NVLO15381 856 aaKnown RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 TSPAN6O43657 245 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 AP1G1O43747 822 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF202O95125 648 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 UGT2B4P06133 528 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 CR2P20023 1033 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 SULT1E1P49888 294 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 SERPINH1P50454 418 aaKnown RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 EIF3IQ13347 325 aaKnown RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 ELOCQ15369 112 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 EFHC1Q5JVL4 640 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 ENPP7Q6UWV6 458 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 LRRC31Q6UY01 552 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 CCNJLQ8IV13 435 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 SFTPA2Q8IWL1 248 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 ARL10Q8N8L6 244 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 EHBP1Q8NDI1 1231 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 LMO3Q8TAP4 145 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF564Q8TBZ8 553 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 CENPTQ96BT3 561 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 KLHL32Q96NJ5 620 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 SLC2A13Q96QE2 648 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 WDCPQ9H6R7 721 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 UBE2TQ9NPD8 197 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 GEMIN8Q9NWZ8 242 aaKnown RBP9.26□□□□□ -0.93
CCDC171-209ENST00000498725 MAN2B2Q9Y2E5 1009 aa9.26□□□□□ -0.93
CCDC171-209ENST00000498725 FLNCQ14315 2725 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 C9orf172C9J069 976 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 TMX2-CTNND1H3BSU7 103 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 I6L893 689 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 RIOK3O14730 519 aaKnown RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 HSF2BPO75031 334 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 TM7SF2O76062 418 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 ERBB2P04626 1255 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 ALPIP09923 528 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 CCKBRP32239 447 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 CETN1Q12798 172 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 KCNAB2Q13303 367 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 IRF4Q15306 451 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 ARHGAP44Q17R89 818 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 KLHL40Q2TBA0 621 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 ZNF658Q5TYW1 1059 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 OTUD1Q5VV17 481 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-209ENST00000498725 RETSATQ6NUM9 610 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 GJB7Q6PEY0 223 aa9.25□□□□□ -0.93
CCDC171-209ENST00000498725 BORAQ6PGQ7 559 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms