RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 PACSIN1Q9BY11 444 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 CPEB1Q9BZB8 566 aaKnown RBP10.67□□□□□ -0.7
FXR1-222ENST00000498658 KLC2Q9H0B6 622 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 PCDH18Q9HCL0 1135 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 AASDHPPTQ9NRN7 309 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 SPTLC3Q9NUV7 552 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 IPO11Q9UI26 975 aaKnown RBP10.67□□□□□ -0.7
FXR1-222ENST00000498658 ANKRD6Q9Y2G4 727 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 PCDHGB2Q9Y5G2 931 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 CACNA1AO00555 2505 aa10.67□□□□□ -0.7
FXR1-222ENST00000498658 A0A1B0GVT2 93 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 C16orf96A6NNT2 1141 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 YKT6O15498 198 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 PCDH8O95206 1070 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 KCNK5O95279 499 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 LCA5LO95447 670 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 UGT2B4P06133 528 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 HSPA9P38646 679 aaKnown RBP10.66□□□□□ -0.7
FXR1-222ENST00000498658 CSNK1DP48730 415 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 METAP1P53582 386 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 TAS2R38P59533 333 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 MESDQ14696 234 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 STAT4Q14765 748 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 CYTH1Q15438 398 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 KIF19Q2TAC6 998 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 HLA-BQ31612 363 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 ODF2Q5BJF6 829 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 CFAP58Q5T655 872 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 LEKR1Q6ZMV7 388 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 TMTC1Q8IUR5 882 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 ARHGAP12Q8IWW6 846 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 OXR1Q8N573 874 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 NPWQ8N729 165 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 MFSD2AQ8NA29 543 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 TSC1Q92574 1164 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 SLC6A18Q96N87 628 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 CINPQ9BW66 212 aaPredicted RBP10.66□□□□□ -0.7
FXR1-222ENST00000498658 CALN1Q9BXU9 219 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 GAREM1Q9H706 876 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 FSCN3Q9NQT6 498 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 ACTL7AQ9Y615 435 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 ADAMTS9Q9P2N4 1935 aa10.66□□□□□ -0.7
FXR1-222ENST00000498658 A0A1W2PQ67 120 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 A0A1W2PQU0 124 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 GOLGA6L6A8MZA4 724 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 ZNF487B1APH4 448 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 J3KR12 359 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 TLR4O00206 839 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 PLK4O00444 970 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 NEMP1O14524 444 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 GJB3O75712 270 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 TCF4P15884 667 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 XPAP23025 273 aaPredicted RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 AMPD1P23109 780 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 SERPINA4P29622 427 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 MAT2AP31153 395 aaKnown RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 AKT2P31751 481 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 MAGEA1P43355 309 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 NOVA1P51513 510 aaKnown RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 PPP2CBP62714 309 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 POLR2LP62875 67 aaKnown RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 PPP2CAP67775 309 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 LBRQ14739 615 aaKnown RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 INAVAQ3KP66 663 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 RALGPS1Q5JS13 557 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 ATXN7L2Q5T6C5 722 aaPredicted RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 LRRC38Q5VT99 294 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 TXNRD3NBQ6F5E7 133 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 BRAT1Q6PJG6 821 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 PARS2Q7L3T8 475 aaKnown RBP10.65□□□□□ -0.7
FXR1-222ENST00000498658 TTC7BQ86TV6 843 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 ATPAF2Q8N5M1 289 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 OR6K2Q8NGY2 324 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 KLHL32Q96NJ5 620 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 PSKH2Q96QS6 385 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 C1QTNF7Q9BXJ2 289 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 ATP13A3Q9H7F0 1226 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 ERVMER34-1Q9H9K5 563 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 TM7SF3Q9NS93 570 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 LHX3Q9UBR4 397 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 FADS3Q9Y5Q0 445 aa10.65□□□□□ -0.7
FXR1-222ENST00000498658 ASCC3Q8N3C0 2202 aaKnown RBP10.64□□□□□ -0.71
FXR1-222ENST00000498658 CNOT1A5YKK6 2376 aaKnown RBP10.64□□□□□ -0.71
FXR1-222ENST00000498658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.64□□□□□ -0.71
FXR1-222ENST00000498658 TMEM110-MUSTN1A8MSY1 372 aa10.64□□□□□ -0.71
FXR1-222ENST00000498658 SLC31A1O15431 190 aa10.64□□□□□ -0.71
FXR1-222ENST00000498658 FLRT2O43155 660 aa10.64□□□□□ -0.71
FXR1-222ENST00000498658 MX2P20592 715 aa10.64□□□□□ -0.71
FXR1-222ENST00000498658 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
FXR1-222ENST00000498658 IL4RP24394 825 aa10.64□□□□□ -0.71
FXR1-222ENST00000498658 NFKBIAP25963 317 aa10.64□□□□□ -0.71
FXR1-222ENST00000498658 GJC1P36383 396 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms