RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 LMNB2Q03252 620 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 GALNT2Q10471 571 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 RFTN1Q14699 578 aaPredicted RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 CYTH1Q15438 398 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 POM121L1PQ3SYA9 428 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 WDR45BQ5MNZ6 344 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ZFYVE27Q5T4F4 411 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 SYCP2LQ5T4T6 812 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ATXN7L2Q5T6C5 722 aaPredicted RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 PIP5KL1Q5T9C9 394 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 DCAF12L1Q5VU92 463 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 KIAA1328Q86T90 577 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 KIAA2013Q8IYS2 634 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 TXLNBQ8N3L3 684 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 RYBPQ8N488 228 aaPredicted RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ATPAF2Q8N5M1 289 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 PQLC3Q8N755 202 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 CCDC112Q8NEF3 446 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 OR2T34Q8NGX1 318 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 OR6K2Q8NGY2 324 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 PPP1R16AQ96I34 528 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ZNF599Q96NL3 588 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 HDAC8Q9BY41 377 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 SMOC1Q9H4F8 434 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ZDHHC6Q9H6R6 413 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 DDX56Q9NY93 547 aaKnown RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 EVLQ9UI08 416 aaPredicted RBP11.41□□□□□ -0.58
ERCC8-208ENST00000497892 ALG6Q9Y672 507 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 DUSP10Q9Y6W6 482 aa11.41□□□□□ -0.58
ERCC8-208ENST00000497892 LRRC72A6NJI9 287 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 PATE3B3GLJ2 98 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 KRIT1O00522 736 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 ARHGAP6O43182 974 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 PALMO75781 387 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
ERCC8-208ENST00000497892 PEX11BO96011 259 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 IGHV4-34P06331 123 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 GKP32189 559 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 TAS2R38P59533 333 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 GUCA2AQ02747 115 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 KIF5AQ12840 1032 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 SF3A2Q15428 464 aaKnown RBP11.4□□□□□ -0.58
ERCC8-208ENST00000497892 MYLK3Q32MK0 819 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 TMCO4Q5TGY1 634 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 KIAA0895LQ68EN5 471 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 SLC9A4Q6AI14 798 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 TCEAL6Q6IPX3 200 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 NCEH1Q6PIU2 408 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.4□□□□□ -0.58
ERCC8-208ENST00000497892 RABEPKQ7Z6M1 372 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 DAAM2Q86T65 1068 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 LRRC49Q8IUZ0 686 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 KATNAL2Q8IYT4 538 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 TCEAL3Q969E4 200 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 ARRDC3Q96B67 414 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 BIRC7Q96CA5 298 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 EXOC2Q96KP1 924 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 RNF157Q96PX1 679 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 PSKH2Q96QS6 385 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 OSBPL1AQ9BXW6 950 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 KDM4CQ9H3R0 1056 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 DYRK4Q9NR20 520 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 SUSD2Q9UGT4 822 aa11.4□□□□□ -0.58
ERCC8-208ENST00000497892 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.4□□□□□ -0.58
ERCC8-208ENST00000497892 LNP1A1A4G5 178 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 FAM47DPA6NHR8 397 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 KHNYNO15037 678 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 LATO43561 262 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 FSBPO95073 299 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 TNNT1P13805 278 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CTNNA1P35221 906 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 GARSP41250 739 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 RGRP47804 291 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CSNK1DP48730 415 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CCR5P51681 352 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 NEK3P51956 506 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 GBE1Q04446 702 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 SLC10A7Q0GE19 358 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CCDC15Q0P6D6 951 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 LBRQ14739 615 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 TAZQ16635 292 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 ZNF805Q5CZA5 627 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 TRIM61Q5EBN2 209 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 SLC23A3Q6PIS1 610 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 ERN2Q76MJ5 926 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 PARS2Q7L3T8 475 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 RGL4Q8IZJ4 473 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 ZCCHC9Q8N567 271 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 PLD5Q8N7P1 536 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 LRRC57Q8N9N7 239 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 C12orf50Q8NA57 414 aaPredicted RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 OR14C36Q8NHC7 312 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 C1orf216Q8TAB5 229 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CEP76Q8TAP6 659 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 SNX19Q92543 992 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 FATE1Q969F0 183 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 ORAI3Q9BRQ5 295 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms