RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ZDHHC6Q9H6R6 413 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 TMEM74BQ9NUR3 256 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ETNK2Q9NVF9 386 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 HAUS2Q9NVX0 235 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 LHX3Q9UBR4 397 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 SEPT3Q9UH03 358 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 SLC6A14Q9UN76 642 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 REXO2Q9Y3B8 237 aaKnown RBP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ALG6Q9Y672 507 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CACNA1EQ15878 2313 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3DA0A087WVF3 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3IA0A087WXS9 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3EA0A087X179 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3KA0A087X1G2 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3FA6NER0 549 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 FAM47DPA6NHR8 397 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 C10orf142B7Z368 130 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3LB9A6J9 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 BCAT2O15382 392 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 MAFKO60675 156 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 FSBPO95073 299 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 KRT1P04264 644 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 CFIP05156 583 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 SYPP08247 313 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3HP0C7X1 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 MX2P20592 715 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 MAPK8P45983 427 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 METAP1P53582 386 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 LIMK1P53667 647 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 GALNT2Q10471 571 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 KIF5AQ12840 1032 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 LBRQ14739 615 aaKnown RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 SF3A2Q15428 464 aaKnown RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 POM121L1PQ3SYA9 428 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TRIM61Q5EBN2 209 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 PIP5KL1Q5T9C9 394 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 NCBP2-AS2Q69YL0 99 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3GQ6DHY5 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3CQ6IPX1 549 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TIGD7Q6NT04 549 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 FBXL19Q6PCT2 694 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 GDPD4Q6W3E5 623 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 DAAM2Q86T65 1068 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TRIM69Q86WT6 500 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TBC1D3Q8IZP1 549 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 NETO1Q8TDF5 533 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 HCAR2Q8TDS4 363 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 SNX19Q92543 992 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 RAPGEF5Q92565 580 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 ARRDC3Q96B67 414 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 PSKH2Q96QS6 385 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 TUBGCP5Q96RT8 1024 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 CINPQ9BW66 212 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 MAK16Q9BXY0 300 aaKnown RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 ZDHHC5Q9C0B5 715 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 GRPEL1Q9HAV7 217 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 CAPN10Q9HC96 672 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 KLHL11Q9NVR0 708 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 DKK3Q9UBP4 350 aa11.62□□□□□ -0.55
HLA-B-254ENST00000497377 EIF2B4Q9UI10 523 aaKnown RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.62□□□□□ -0.55
HLA-B-254ENST00000497377 ATXN2Q99700 1313 aaKnown RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 A0A1W2PPC4 97 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 LNP1A1A4G5 178 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 RCCD1A6NED2 376 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 GOLGA6L3A6NEY3 463 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 C3orf70A6NLC5 250 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 LATO43561 262 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 AP1G1O43747 822 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 NRDCO43847 1150 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 MFSD11O43934 449 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 IGHV4-34P06331 123 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 ADRB3P13945 408 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 GARSP41250 739 aaKnown RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 SUOXP51687 545 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 AFF3P51826 1226 aaKnown RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 NAP1L1P55209 391 aaKnown RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 IRX4P78413 519 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 TEAD4Q15561 434 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 RALGPS1Q5JS13 557 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 ATXN7L2Q5T6C5 722 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 ARHGAP36Q6ZRI8 547 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 PRPF39Q86UA1 669 aaKnown RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 KATNAL2Q8IYT4 538 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 PQLC3Q8N755 202 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 OR6K2Q8NGY2 324 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 C1orf216Q8TAB5 229 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 UBE2Q2Q8WVN8 375 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 ZNF641Q96N77 438 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 TSGA13Q96PP4 275 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 EDEM2Q9BV94 578 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 MIR1-1HGQ9H1L0 117 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 SMOC1Q9H4F8 434 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 CDV3Q9UKY7 258 aaKnown RBP11.61□□□□□ -0.55
HLA-B-254ENST00000497377 TFR2Q9UP52 801 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 DMTF1Q9Y222 760 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms