RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 LPOP22079 712 aaPredicted RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 RPS24P62847 133 aaKnown RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 ANKRD20A4Q4UJ75 823 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 NEPROQ6NW34 567 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 RSPO2Q6UXX9 243 aaPredicted RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 KYAT3Q6YP21 454 aaKnown RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 GBP7Q8N8V2 638 aaPredicted RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 RANBP9Q96S59 729 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 TRIM55Q9BYV6 548 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 TXLNGYQ9BZA5 131 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 CEP44Q9C0F1 390 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 MRGBPQ9NV56 204 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 OBP2AQ9NY56 170 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 GDE1Q9NZC3 331 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 C2orf78A6NCI8 922 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 C1QTNF3-AMACRE9PGA6 284 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 VPS26AO75436 327 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 POP4O95707 220 aaKnown RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 PABPC1P11940 636 aaKnown RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 IGFBP6P24592 240 aaPredicted RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 CSKP41240 450 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TMPRSS15P98073 1019 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 ZBTB17Q13105 803 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TTMPQ5BVD1 217 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 FAM46CQ5VWP2 391 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 OTOP3Q7RTS5 596 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 NLRP14Q86W24 1093 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 MPP5Q8N3R9 675 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 BHMTQ93088 406 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 IGSF8Q969P0 613 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 PBXIP1Q96AQ6 731 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 ULK4Q96C45 1275 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TRIM56Q9BRZ2 755 aaKnown RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 PITPNM3Q9BZ71 974 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 ADAM7Q9H2U9 754 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 PCMTD2Q9NV79 361 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 OSER1Q9NX31 292 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 KCTD5Q9NXV2 234 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 SUN2Q9UH99 717 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 CRLS1Q9UJA2 301 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TEX264Q9Y6I9 313 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TDRD15B5MCY1 1934 aaKnown RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 UBA6A0AVT1 1052 aaPredicted RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 QSOX1O00391 747 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 SNUPNO95149 360 aaKnown RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 SHBGP04278 402 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 RBP1P09455 135 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 MAGEA10P43363 369 aaPredicted RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 RASSF2P50749 326 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 CLCN4P51793 760 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 NSUN2Q08J23 767 aaKnown RBP eCLIP8.46□□□□□ -1.06
USP54-215ENST00000497106 GTF2H3Q13889 308 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 STARD3Q14849 445 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TCTN1Q2MV58 587 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 ALFQ53S48 1182 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 GRASPQ7Z6J2 395 aaPredicted RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 GDAP1Q8TB36 358 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 HEXDCQ8WVB3 486 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 TLCD1Q96CP7 247 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 PSKH2Q96QS6 385 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 RC3H2Q9HBD1 1191 aaKnown RBP8.46□□□□□ -1.06
USP54-215ENST00000497106 CATSPERZQ9NTU4 200 aa8.46□□□□□ -1.06
USP54-215ENST00000497106 RPP40O75818 363 aaKnown RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 CNTN5O94779 1100 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 GSRP00390 522 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 APODP05090 189 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 ADH5P11766 374 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 DNAJB1P25685 340 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 DGKGP49619 791 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 SKIV2LQ15477 1246 aaKnown RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 ZNF284Q2VY69 593 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 FNDC3BQ53EP0 1204 aaKnown RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 ZRANB3Q5FWF4 1079 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 MROH9Q5TGP6 573 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 FAM45BPQ6NSW5 357 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 CIR1Q86X95 450 aaPredicted RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 WDR75Q8IWA0 830 aaKnown RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 HS6ST3Q8IZP7 471 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 C4orf33Q8N1A6 199 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 FAM45AQ8TCE6 357 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 OR8D1Q8WZ84 308 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 SUSD6Q92537 303 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 IMP4Q96G21 291 aaKnown RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 EML4Q9HC35 981 aaKnown RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 TMEM30AQ9NV96 361 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 GGA2Q9UJY4 613 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 RAI2Q9Y5P3 530 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 SLC7A4O43246 635 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 SPAG7O75391 227 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 DCTN3O75935 186 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 TMCC1O94876 653 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 TPH1P17752 444 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 LSP1P33241 339 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 ERVFC1P60507 584 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 DSC2Q02487 901 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 TAF1AQ15573 450 aaPredicted RBP8.45□□□□□ -1.06
USP54-215ENST00000497106 ICE2Q659A1 982 aa8.45□□□□□ -1.06
USP54-215ENST00000497106 BHLHA9Q7RTU4 235 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms