RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 IL1AP01583 271 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 MYF6P23409 242 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 HNF1BP35680 557 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 RRP1P56182 461 aaKnown RBP4.42□□□□□ -1.7
TRIM4-205ENST00000496896 PLCB4Q15147 1175 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 PRAMEF19Q5SWL8 479 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 ATG9BQ674R7 924 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 NEK10Q6ZWH5 1172 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 C16orf82Q7Z2V1 217 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 TCP11L2Q8N4U5 519 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 ANKRD44Q8N8A2 993 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 RTP4Q96DX8 246 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 RBM17Q96I25 401 aaKnown RBP4.42□□□□□ -1.7
TRIM4-205ENST00000496896 SLC25A33Q9BSK2 321 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 FAM167BQ9BTA0 163 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 MSTO1Q9BUK6 570 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 CTDSP1Q9GZU7 261 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 CXorf56Q9H5V9 222 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 TTC12Q9H892 705 aaPredicted RBP4.42□□□□□ -1.7
TRIM4-205ENST00000496896 NOD2Q9HC29 1040 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 NLKQ9UBE8 527 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 SUFUQ9UMX1 484 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 COMMD10Q9Y6G5 202 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 LAMC3Q9Y6N6 1575 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 PTPN23Q9H3S7 1636 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 SNAPC4Q5SXM2 1469 aa4.42□□□□□ -1.7
TRIM4-205ENST00000496896 TONSLQ96HA7 1378 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 STX16-NPEPL1H3BU86 382 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 CHL1O00533 1208 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 STX16O14662 325 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 SLC16A5O15375 505 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 IRAK2O43187 625 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 DHRS4L1P0CG22 281 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 CKMT1AP12532 417 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 DAOP14920 347 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 ZNF12P17014 697 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 ARL4CP56559 192 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 RPL36AP83881 106 aaKnown RBP4.41□□□□□ -1.7
TRIM4-205ENST00000496896 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 TRAF3Q13114 568 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 C9orf57Q5W0N0 161 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 FJX1Q86VR8 437 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 HERC6Q8IVU3 1022 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 MIGA1Q8NAN2 632 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 LMO3Q8TAP4 145 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 TBC1D22AQ8WUA7 517 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 AFG1LQ8WV93 481 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 RNFT2Q96EX2 444 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 DUX5Q96PT3 197 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 NPFFR1Q9GZQ6 430 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 LHPPQ9H008 270 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 MVB12BQ9H7P6 319 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 ZNF556Q9HAH1 456 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 WDR6Q9NNW5 1121 aaKnown RBP4.41□□□□□ -1.7
TRIM4-205ENST00000496896 ENTPD7Q9NQZ7 604 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 FEM1BQ9UK73 627 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 CNPY2Q9Y2B0 182 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 DNAJC16Q9Y2G8 782 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 GDAQ9Y2T3 454 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 PCDHGB1Q9Y5G3 927 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 TCOF1Q13428 1488 aaKnown RBP4.41□□□□□ -1.7
TRIM4-205ENST00000496896 FANCD2Q9BXW9 1451 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 ARHGEF11O15085 1522 aa4.41□□□□□ -1.7
TRIM4-205ENST00000496896 MYOM3Q5VTT5 1437 aa4.4□□□□□ -1.7
TRIM4-205ENST00000496896 MIA2Q96PC5 1412 aa4.4□□□□□ -1.7
TRIM4-205ENST00000496896 ABCA5Q8WWZ7 1642 aa4.4□□□□□ -1.7
TRIM4-205ENST00000496896 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 A0A0U1RQJ8 604 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 A0A1B0GVM2 712 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 DENND3A2RUS2 1198 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 B9A039 149 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 SERPINI2O75830 405 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 ADAP00813 363 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 CHRM4P08173 479 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 CNPP09543 421 aaKnown RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 CTPS1P17812 591 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 MXI1P50539 228 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 TUBA1BP68363 451 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 ANKRD1Q15327 319 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 ME3Q16798 604 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 PLEKHO1Q53GL0 409 aaPredicted RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 SH2D4BQ5SQS7 431 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 C9orf50Q5SZB4 431 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 ANO1Q5XXA6 986 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 PRSS57Q6UWY2 283 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 H1FNTQ75WM6 255 aaPredicted RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 DENND6AQ8IWF6 608 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 FTSJ3Q8IY81 847 aaKnown RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 ATOH1Q92858 354 aaPredicted RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 RNF183Q96D59 192 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 RPS6KC1Q96S38 1066 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 FIZ1Q96SL8 496 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 VPS33BQ9H267 617 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 IL25Q9H293 177 aa4.4□□□□□ -1.71
TRIM4-205ENST00000496896 DDX31Q9H8H2 851 aaKnown RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 TLR8Q9NR97 1041 aaKnown RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 SPATS2LQ9NUQ6 558 aaKnown RBP4.4□□□□□ -1.71
TRIM4-205ENST00000496896 IFT80Q9P2H3 777 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms