RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 FAM27E3Q08E93 113 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 TRAF2Q12933 501 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 PPFIA1Q13136 1202 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 LPIN1Q14693 890 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 NAA25Q14CX7 972 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 HLFQ16534 295 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 IL20RBQ6UXL0 311 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 RBMXL3Q8N7X1 1067 aaKnown RBP5.93□□□□□ -1.46
SF3B1-212ENST00000496458 MCPH1Q8NEM0 835 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 GDPD5Q8WTR4 605 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 TMED6Q8WW62 240 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 TXNDC15Q96J42 360 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 FAM84BQ96KN1 310 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-212ENST00000496458 YME1L1Q96TA2 773 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 EPHX3Q9H6B9 360 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 CLK4Q9HAZ1 481 aaKnown RBP5.93□□□□□ -1.46
SF3B1-212ENST00000496458 TMEM51Q9NW97 253 aa5.93□□□□□ -1.46
SF3B1-212ENST00000496458 CENPAP49450 140 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 TBL3Q12788 808 aaKnown RBP5.92□□□□□ -1.46
SF3B1-212ENST00000496458 TRAF3Q13114 568 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 IZUMO4Q1ZYL8 232 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 MAP3K21Q5TCX8 1036 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 CREB3L2Q70SY1 520 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 PRSS45Q7RTY3 260 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 LURAP1LQ8IV03 231 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 DENND6AQ8IWF6 608 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 DCP1BQ8IZD4 617 aaKnown RBP5.92□□□□□ -1.46
SF3B1-212ENST00000496458 CPXM2Q8N436 756 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 ZMIZ2Q8NF64 920 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 FAM216AQ8WUB2 273 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 TMEM170AQ8WVE7 144 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 CD180Q99467 661 aa5.92□□□□□ -1.46
SF3B1-212ENST00000496458 C6orf106Q9H6K1 298 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-212ENST00000496458 SPATS2LQ9NUQ6 558 aaKnown RBP5.92□□□□□ -1.46
SF3B1-212ENST00000496458 TRIP12Q14669 1992 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 PRSS44E7EML9 344 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 PRR23D1E9PI22 279 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 SERPINI2O75830 405 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 PRR23D2P0DMB1 279 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 ZNF12P17014 697 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 TTKP33981 857 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 MXI1P50539 228 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 CLCN5P51795 746 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 ART1P52961 327 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 EDRF1Q3B7T1 1238 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 PLEKHO1Q53GL0 409 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 TYW3Q6IPR3 259 aaKnown RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 C18orf65Q6ZTR6 163 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 MB21D2Q8IYB1 491 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 SMRP1Q8NCR6 262 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 PSMD1Q99460 953 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 TAOK3Q9H2K8 898 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 RIC8AQ9NPQ8 531 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 OCIAD1Q9NX40 245 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.91□□□□□ -1.46
SF3B1-212ENST00000496458 PCDHGB1Q9Y5G3 927 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 CCDC180Q9P1Z9 1646 aa5.91□□□□□ -1.46
SF3B1-212ENST00000496458 C17orf113A0A1B0GUU1 675 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 TIMM23O14925 209 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 ATP2C2O75185 946 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 TFPIP10646 304 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 LIFRP42702 1097 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 ADORA2A-AS1P86434 159 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 BNC1Q01954 994 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 DCAF6Q58WW2 860 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 ATG16L1Q676U5 607 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 MOB3CQ70IA8 216 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 LSM14AQ8ND56 463 aaKnown RBP5.9□□□□□ -1.46
SF3B1-212ENST00000496458 RFWD2Q8NHY2 731 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 LMO3Q8TAP4 145 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 UBE2Q2Q8WVN8 375 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 FIZ1Q96SL8 496 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 SLC25A33Q9BSK2 321 aa5.9□□□□□ -1.46
SF3B1-212ENST00000496458 AGO1Q9UL18 857 aaKnown RBP5.9□□□□□ -1.46
SF3B1-212ENST00000496458 A0A1B0GVM2 712 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 ARHGAP10A1A4S6 786 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 DYTNA2CJ06 578 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 TYW5A2RUC4 315 aaKnown RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 PABPN1LA6NDY0 278 aaKnown RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 EIF3FO00303 357 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 EBAG9O00559 213 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 ZBTB11O95625 1053 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 MYF6P23409 242 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 RPL3P39023 403 aaKnown RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 RRP1P56182 461 aaKnown RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 SEC61A1P61619 476 aaKnown RBP5.89□□□□□ -1.47
SF3B1-212ENST00000496458 CYP4A11Q02928 519 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 UBE3AQ05086 875 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 KIF5AQ12840 1032 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 WDR45BQ5MNZ6 344 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 C17orf99Q6UX52 265 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 BBS12Q6ZW61 710 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 ADGRG6Q86SQ4 1221 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 ANKRD18AQ8IVF6 992 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 CPOQ8IVL8 374 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 CCDC105Q8IYK2 499 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 EYA3Q99504 573 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 PHF7Q9BWX1 381 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms