RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CATSPERZQ9NTU4 200 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 RBBP6Q7Z6E9 1792 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 BCLAF3A2AJT9 711 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 J3KR12 359 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 KLF8O95600 359 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 SERPIND1P05546 499 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 OR56A5P0C7T3 313 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PFKLP17858 780 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 GNGT1P63211 74 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 SPANXN3Q5MJ09 141 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PIK3R6Q5UE93 754 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 TMEM25Q86YD3 366 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 CMASQ8NFW8 434 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ARHGEF2Q92974 986 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 IGSF8Q969P0 613 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 SIPA1Q96FS4 1042 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 KLF6Q99612 283 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 TMEM248Q9NWD8 314 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PCYOX1Q9UHG3 505 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNHIT2Q9UHR6 403 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 A0A0D9SEW6 157 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 NDUFAB1O14561 156 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ASGR2P07307 311 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PTPN3P26045 913 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 CDK16Q00536 496 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 MGAT5Q09328 741 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 RHBDF2Q6PJF5 856 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PRR23CQ6ZRP0 262 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PRPF39Q86UA1 669 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF567Q8N184 647 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 TRABDQ9H4I3 376 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 C8orf33Q9H7E9 229 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ECT2Q9H8V3 914 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 L2HGDHQ9H9P8 463 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ZFYVE1Q9HBF4 777 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 VPS45Q9NRW7 570 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 EDDM13A0A1B0GTR0 161 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 HMGB1P1B2RPK0 211 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM72CH0Y354 149 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 EIF3HO15372 352 aaKnown RBP eCLIP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 CDH16O75309 829 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 LPOP22079 712 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 RFTN1Q14699 578 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 INSCQ1MX18 579 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM78AQ5JUQ0 283 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM72AQ5TYM5 149 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ATG16L1Q676U5 607 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM72DQ6L9T8 149 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 TRAF7Q6Q0C0 670 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF852Q6ZMS4 543 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PRR23BQ6ZRT6 265 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM72BQ86X60 149 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 MAFAQ8NHW3 353 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 CLP1Q92989 425 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 GBA3Q9H227 469 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 CDC42EP4Q9H3Q1 356 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 CACNA2D2Q9NY47 1150 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 A6NNZ2 444 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 LINC01565O15544 149 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 KAT7O95251 611 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 ARSAP15289 507 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 MAPK9P45984 424 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 LMAN2Q12907 356 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 GRIN2CQ14957 1233 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 TUBB8Q3ZCM7 444 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 PDPK2PQ6A1A2 396 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM151BQ6UXP7 276 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 OOSP2Q86WS3 158 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 OSCP1Q8WVF1 389 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 TMEM159Q96B96 161 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 RNF38Q9H0F5 515 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC25A51Q9H1U9 297 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 MFHAS1Q9Y4C4 1052 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 LOXHD1Q8IVV2 1947 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 TTC24A2A3L6 582 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 FMO4P31512 558 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 ANO7Q6IWH7 933 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 MSANTD2Q6P1R3 559 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 OTOAQ7RTW8 1153 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 GPR149Q86SP6 731 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 C4orf33Q8N1A6 199 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 MYO1HQ8N1T3 1032 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 SNX31Q8N9S9 440 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 PLXNA1Q9UIW2 1896 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 A0A1W2PQ67 120 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 CACNB4O00305 520 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 MT-CYBP00156 380 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 PCCBP05166 539 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 NR1D1P20393 614 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM3CQ92520 227 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 SPATA6Q9NWH7 488 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 CRYL1Q9Y2S2 319 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 TRIM49D1C9J1S8 452 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 ATP8B1O43520 1251 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 KDELR3O43731 214 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 STMN1P16949 149 aa9.55□□□□□ -0.88
GAPVD1-219ENST00000495955 GRIA2P42262 883 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms