RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SARDHQ9UL12 918 aa17.32■□□□□ 0.36
HDAC6-235ENST00000495515 A0A1W2PP55 124 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 BCLAF3A2AJT9 711 aaKnown RBP17.31■□□□□ 0.36
HDAC6-235ENST00000495515 CFAP69A5D8W1 941 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 MUSKO15146 869 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 INSIG1O15503 277 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 LILRB5O75023 590 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 NDUFS2O75306 463 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 UGT2B4P06133 528 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 PRLRP16471 622 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 CR2P20023 1033 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 CA4P22748 312 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 ITGB7P26010 798 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 CD6P30203 668 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 RGRP47804 291 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 MAXP61244 160 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 BCL2L1Q07817 233 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 ALG1LQ6GMV1 187 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 ALYREFQ86V81 257 aaKnown RBP17.31■□□□□ 0.36
HDAC6-235ENST00000495515 PGBD5Q8N414 524 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 HCAR2Q8TDS4 363 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 RLN3Q8WXF3 142 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 WDR24Q96S15 920 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 SEMA3CQ99985 751 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 HDAC8Q9BY41 377 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 BTBD1Q9H0C5 482 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 KLHL8Q9P2G9 620 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-235ENST00000495515 TRHDEQ9UKU6 1024 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 TTC7AQ9ULT0 858 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-235ENST00000495515 ATP8A1Q9Y2Q0 1164 aa17.31■□□□□ 0.36
HDAC6-235ENST00000495515 NYNRINQ9P2P1 1898 aaKnown RBP17.31■□□□□ 0.36
HDAC6-235ENST00000495515 IGHV1OR15-9A0A0B4J2B8 117 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 A0A1W2PQ67 120 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 TCRBV7S2A1N4TA0A589 114 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 RNF103O00237 685 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 PGRMC1O00264 195 aaKnown RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 PTPN3P26045 913 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 RBL1P28749 1068 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 GKP32189 559 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 NEK3P51956 506 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 ZBTB17Q13105 803 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 SIM2Q14190 667 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 ELF2Q15723 593 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 POM121L1PQ3SYA9 428 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 FBXL19Q6PCT2 694 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 NCEH1Q6PIU2 408 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 BRAT1Q6PJG6 821 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 B4GALNT4Q76KP1 1039 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 ERN2Q76MJ5 926 aaKnown RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 ADAT2Q7Z6V5 191 aaKnown RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 RASGEF1CQ8N431 466 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 AADATQ8N5Z0 425 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 SLC35B2Q8TB61 432 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 TOE1Q96GM8 510 aaKnown RBP17.3■□□□□ 0.36
HDAC6-235ENST00000495515 TEKT5Q96M29 485 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 KLHL32Q96NJ5 620 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 AGAP3Q96P47 875 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 FAM118BQ9BPY3 351 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 SEMA4AQ9H3S1 761 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 SUV39H2Q9H5I1 410 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 NOD2Q9HC29 1040 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 DKK3Q9UBP4 350 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 SAR1BQ9Y6B6 198 aa17.3■□□□□ 0.36
HDAC6-235ENST00000495515 LRRC72A6NJI9 287 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 KCNN4O15554 427 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 HRO43593 1189 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 SOCS5O75159 536 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 RHOBTB1O94844 696 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 SERPINF2P08697 491 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 XPAP23025 273 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-235ENST00000495515 NFKBIAP25963 317 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 CASQ1P31415 396 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 DRD3P35462 400 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 SUOXP51687 545 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
HDAC6-235ENST00000495515 WASHC5Q12768 1159 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 CNTN1Q12860 1018 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 CCNG2Q16589 344 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 SPDYCQ5MJ68 293 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 PAPD7Q5XG87 772 aaKnown RBP17.29■□□□□ 0.36
HDAC6-235ENST00000495515 ITPRIPL1Q6GPH6 555 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 PID1Q7Z2X4 250 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 CAMK1DQ8IU85 385 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 CNTD1Q8N815 330 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 ACTRT1Q8TDG2 376 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 RAB7BQ96AH8 199 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 ARRDC3Q96B67 414 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 PCED1AQ9H1Q7 454 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 NEUROG2Q9H2A3 272 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 KDM4CQ9H3R0 1056 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 WSB2Q9NYS7 404 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-235ENST00000495515 INVSQ9Y283 1065 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 R3HDM2Q9Y2K5 976 aaKnown RBP17.29■□□□□ 0.36
HDAC6-235ENST00000495515 R4GN57 208 aa17.29■□□□□ 0.36
HDAC6-235ENST00000495515 PIEZO1Q92508 2521 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms