RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 KRIT1O00522 736 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 GCATO75600 419 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 TFE3P19532 575 aaPredicted RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 ETFBP38117 255 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 BLKP51451 505 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 GEMIN4P57678 1058 aaKnown RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 YPEL5P62699 121 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 PPARDQ03181 441 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 EIF3IQ13347 325 aaKnown RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 EXOC3L4Q17RC7 722 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 SLC25A52Q3SY17 297 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 ZNF805Q5CZA5 627 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 FAM102AQ5T9C2 384 aaPredicted RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 VPS36Q86VN1 386 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 ELOA2Q8IYF1 753 aaPredicted RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 SHC3Q92529 594 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 LIN37Q96GY3 246 aaPredicted RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 TBATAQ96M53 351 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 GFM1Q96RP9 751 aaKnown RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 HAPLN3Q96S86 360 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 LRRC61Q9BV99 259 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 TCEAL2Q9H3H9 227 aaPredicted RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 PLCB1Q9NQ66 1216 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 TMPRSS4Q9NRS4 437 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 ATXN7L1Q9ULK2 861 aaPredicted RBP14.48□□□□□ -0.09
VARS-228ENST00000495010 HPCAL4Q9UM19 191 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 ITM2BQ9Y287 266 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 I6L893 689 aaPredicted RBP14.47□□□□□ -0.09
VARS-228ENST00000495010 TOR1BO14657 336 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 PLD2O14939 933 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 YY2O15391 372 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 ZMPSTE24O75844 475 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 CTSEP14091 401 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 TSHRP16473 764 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 SLC5A2P31639 672 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 ABL2P42684 1182 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 CSRP3P50461 194 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 SNRPD1P62314 119 aaKnown RBP14.47□□□□□ -0.09
VARS-228ENST00000495010 ARF5P84085 180 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 MORC3Q14149 939 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 ELOCQ15369 112 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 XKR5Q6UX68 686 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 RAB11FIP2Q7L804 512 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 TTC7BQ86TV6 843 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 PLPP6Q8IY26 295 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 FSTL5Q8N475 847 aaPredicted RBP14.47□□□□□ -0.09
VARS-228ENST00000495010 TMEM35BQ8NCS4 154 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 OR6K2Q8NGY2 324 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 CXorf40AQ8TE69 158 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 NT5C3BQ969T7 300 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 ISG20Q96AZ6 181 aaKnown RBP14.47□□□□□ -0.09
VARS-228ENST00000495010 C18orf8Q96DM3 657 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 OSBPL1AQ9BXW6 950 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 SIRPGQ9P1W8 387 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 GGT7Q9UJ14 662 aa14.47□□□□□ -0.09
VARS-228ENST00000495010 CYSRT1A8MQ03 144 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 MMP20O60882 483 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 TM7SF2O76062 418 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 POP4O95707 220 aaKnown RBP14.46□□□□□ -0.09
VARS-228ENST00000495010 UGT2B4P06133 528 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 ALPIP09923 528 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 JMJD7P0C870 316 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 BMP6P22004 513 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 GKP32189 559 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 EIF4A3P38919 411 aaKnown RBP14.46□□□□□ -0.09
VARS-228ENST00000495010 INHBCP55103 352 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 BPIFB4P59827 614 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 APBA1Q02410 837 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 MACC1Q6ZN28 852 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 SLC47A2Q86VL8 602 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 ARL10Q8N8L6 244 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 MSANTD4Q8NCY6 345 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 OR2AP1Q8NGE2 309 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 CENPTQ96BT3 561 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 SGF29Q96ES7 293 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 KLHL32Q96NJ5 620 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 SEPT10Q9P0V9 454 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 IL17BQ9UHF5 180 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 DNAJC12Q9UKB3 198 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 PCDHGA7Q9Y5G6 932 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 ACTL7AQ9Y615 435 aa14.46□□□□□ -0.09
VARS-228ENST00000495010 MYO18BQ8IUG5 2567 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 CXorf51AA0A1B0GTR3 108 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 GOLGA8SH3BPF8 625 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 NTN3O00634 580 aaPredicted RBP14.45□□□□□ -0.1
VARS-228ENST00000495010 GSRP00390 522 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 PON1P27169 355 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 UGT1A5P35504 534 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 IGFALSP35858 605 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 ACVRL1P37023 503 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 SCNN1AP37088 669 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 PDX1P52945 283 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 RAD51Q06609 339 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 MYLK3Q32MK0 819 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 SMYD5Q6GMV2 418 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 RWDD4Q6NW29 188 aaKnown RBP14.45□□□□□ -0.1
VARS-228ENST00000495010 GDPD4Q6W3E5 623 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 RD3Q7Z3Z2 195 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 FAM131BQ86XD5 332 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 GKN2Q86XP6 184 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms