RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ARHGEF26Q96DR7 871 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 KLHDC7BQ96G42 594 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 BMFQ96LC9 184 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 CALN1Q9BXU9 219 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 EDEM3Q9BZQ6 932 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 ZWILCHQ9H900 591 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 PDFQ9HBH1 243 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 ETNK2Q9NVF9 386 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 UCKL1Q9NWZ5 548 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 CWC15Q9P013 229 aaKnown RBP10.77□□□□□ -0.69
NELFE-213ENST00000494956 ZMIZ1Q9ULJ6 1067 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 CAPN11Q9UMQ6 739 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 DMTF1Q9Y222 760 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 APOBEC2Q9Y235 224 aaKnown RBP10.77□□□□□ -0.69
NELFE-213ENST00000494956 MSRB2Q9Y3D2 182 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 SPEGQ15772 3267 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 COL5A1P20908 1838 aaPredicted RBP10.77□□□□□ -0.69
NELFE-213ENST00000494956 MYLKQ15746 1914 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 A0A1W2PQJ5 194 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 TTC24A2A3L6 582 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 DFFAO00273 331 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 FGF10O15520 208 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 DAPK3O43293 454 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 TNFSF14O43557 240 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 PRPSAP2O60256 369 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 BUB1BO60566 1050 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 RNF8O76064 485 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 POP4O95707 220 aaKnown RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 PRKCGP05129 697 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 MYF5P13349 255 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 HNRNPA2B1P22626 353 aaKnown RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 AKT2P31751 481 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 AIF1P55008 147 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 GEMIN4P57678 1058 aaKnown RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 ZBED6P86452 979 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 NEK5Q6P3R8 708 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 DHRS13Q6UX07 377 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 GDPD4Q6W3E5 623 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 Q6ZSR6 202 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 KANSL1Q7Z3B3 1105 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 PTAR1Q7Z6K3 402 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 ZSWIM9Q86XI8 627 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 FNIP1Q8TF40 1166 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 HSPH1Q92598 858 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 FEM1CQ96JP0 617 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 CNDP2Q96KP4 475 aaKnown RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 NSMCE3Q96MG7 304 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 GDAP1L1Q96MZ0 367 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 KLF6Q99612 283 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 CDC6Q99741 560 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 NUP85Q9BW27 656 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 SLC17A9Q9BYT1 436 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 RETREG1Q9H6L5 497 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 UBA2Q9UBT2 640 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 FTSJ1Q9UET6 329 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 RALYQ9UKM9 306 aaKnown RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 COQ6Q9Y2Z9 468 aa10.76□□□□□ -0.69
NELFE-213ENST00000494956 KMT2BQ9UMN6 2715 aaPredicted RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 GOLGA4Q13439 2230 aaKnown RBP10.76□□□□□ -0.69
NELFE-213ENST00000494956 CACNA1BQ00975 2339 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 USP24Q9UPU5 2620 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 NEMP1O14524 444 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 ENC1O14682 589 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 MUSKO15146 869 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 DFNA5O60443 496 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 PRAMEF11O60813 436 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 MMP20O60882 483 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 DKK1O94907 266 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 TRIM16O95361 564 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 LDOC1O95751 146 aaPredicted RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 IGSF6O95976 241 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 SERPING1P05155 500 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 RARAP10276 462 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 TIMP2P16035 220 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 DESP17661 470 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 AMPD1P23109 780 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 EIF4A3P38919 411 aaKnown RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 RXRGP48443 463 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 ARRB1P49407 418 aaPredicted RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 RPS21P63220 83 aaKnown RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 CCDC15Q0P6D6 951 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 PARP15Q460N3 678 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 PPP1R2P3Q6NXS1 205 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 ABI3BPQ7Z7G0 1075 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 TTC7BQ86TV6 843 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 IQCHQ86VS3 1027 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 SLC25A45Q8N413 288 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 RNF214Q8ND24 703 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 WRAP53Q9BUR4 548 aaKnown RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 PACSIN1Q9BY11 444 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 ERVMER34-1Q9H9K5 563 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 TPX2Q9ULW0 747 aaKnown RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 LUC7L2Q9Y383 392 aaKnown RBP10.75□□□□□ -0.69
NELFE-213ENST00000494956 SCINQ9Y6U3 715 aa10.75□□□□□ -0.69
NELFE-213ENST00000494956 EPG5Q9HCE0 2579 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 CXorf51AA0A1B0GTR3 108 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 ZSCAN5CA6NGD5 496 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms