RNA–Protein interactions for RNA: ENST00000494917.6

CCDC180-206, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 2,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-206ENST00000494917 CFAP52Q8N1V2 620 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 OR6Y1Q8NGX8 325 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 FBXO27Q8NI29 283 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 MFSD3Q96ES6 412 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 CLPTM1LQ96KA5 538 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 C1orf74Q96LT6 269 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 KLHL5Q96PQ7 755 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 SRPK1Q96SB4 655 aaKnown RBP11.15□□□□□ -0.62
CCDC180-206ENST00000494917 C1orf21Q9H246 121 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 ATXN3LQ9H3M9 355 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 CHRAC1Q9NRG0 131 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 TRHDEQ9UKU6 1024 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 PPM1HQ9ULR3 514 aa11.15□□□□□ -0.62
CCDC180-206ENST00000494917 GOLGA8TH3BQL2 631 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 RNASEH1O60930 286 aaKnown RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 RFPL1O75677 317 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 RPL10AP62906 217 aaKnown RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 LSAMPQ13449 338 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 HNRNPDQ14103 355 aaKnown RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 TTC39BQ5VTQ0 682 aaPredicted RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 KYAT3Q6YP21 454 aaKnown RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 RNF168Q8IYW5 571 aaPredicted RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 HMCESQ96FZ2 354 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 ZNF512Q96ME7 567 aaPredicted RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 TSGA13Q96PP4 275 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 SLC13A1Q9BZW2 595 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 EBF3Q9H4W6 596 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 CASS4Q9NQ75 786 aa11.15□□□□□ -0.63
CCDC180-206ENST00000494917 RBM22Q9NW64 420 aaKnown RBP eCLIP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 IPO11Q9UI26 975 aaKnown RBP11.15□□□□□ -0.63
CCDC180-206ENST00000494917 MATN3O15232 486 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 MTSS1O43312 755 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 USP1O94782 785 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 SNRPAP09012 282 aaKnown RBP11.14□□□□□ -0.63
CCDC180-206ENST00000494917 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 PABPC4LP0CB38 370 aaKnown RBP11.14□□□□□ -0.63
CCDC180-206ENST00000494917 PGAM1P18669 254 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ABCG1P45844 678 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 MAXP61244 160 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 COG7P83436 770 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ASPHQ12797 758 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 AFMIDQ63HM1 303 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ITPRIPL1Q6GPH6 555 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 IPMKQ8NFU5 416 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ATP2A3Q93084 1043 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 E2F7Q96AV8 911 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ZNF669Q96BR6 464 aaPredicted RBP11.14□□□□□ -0.63
CCDC180-206ENST00000494917 BTN2A3PQ96KV6 586 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 RILPQ96NA2 401 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 RPRD1AQ96P16 312 aaPredicted RBP11.14□□□□□ -0.63
CCDC180-206ENST00000494917 IL12RB2Q99665 862 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 GKN1Q9NS71 199 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ZDHHC7Q9NXF8 308 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 PMPCBO75439 489 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ALDH1A2O94788 518 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 SLC2A3P11169 496 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ALDH18A1P54886 795 aaKnown RBP11.14□□□□□ -0.63
CCDC180-206ENST00000494917 AQP5P55064 265 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 CDK18Q07002 472 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 BST1Q10588 318 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 RAPH1Q70E73 1250 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 OTOP2Q7RTS6 562 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 DHDDSQ86SQ9 333 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 LCA5Q86VQ0 697 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ZNF354CQ86Y25 554 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 SLC25A41Q8N5S1 370 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ATP6V0D2Q8N8Y2 350 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 AGAP2Q99490 1192 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 VAT1Q99536 393 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 ZYG11BQ9C0D3 744 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 GLOD4Q9HC38 313 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 TMCO1Q9UM00 188 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 SOX13Q9UN79 622 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 TBC1D30Q9Y2I9 924 aa11.14□□□□□ -0.63
CCDC180-206ENST00000494917 E2F8A0AVK6 867 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 BUD23O43709 281 aaKnown RBP11.13□□□□□ -0.63
CCDC180-206ENST00000494917 GJB3O75712 270 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 KRT37O76014 449 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 CSPG5O95196 566 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 PARNO95453 639 aaKnown RBP11.13□□□□□ -0.63
CCDC180-206ENST00000494917 PEX11BO96011 259 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 PENKP01210 267 aaPredicted RBP11.13□□□□□ -0.63
CCDC180-206ENST00000494917 IGLV3-27P01718 113 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 HMGA1P17096 107 aaKnown RBP11.13□□□□□ -0.63
CCDC180-206ENST00000494917 NRG1Q02297 640 aaPredicted RBP11.13□□□□□ -0.63
CCDC180-206ENST00000494917 NIPAL4Q0D2K0 466 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 SLC10A7Q0GE19 358 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 BTG3Q14201 252 aaPredicted RBP11.13□□□□□ -0.63
CCDC180-206ENST00000494917 IHHQ14623 411 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 PIP4K2CQ8TBX8 421 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 NAT14Q8WUY8 206 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 WBP2Q969T9 261 aa11.13□□□□□ -0.63
CCDC180-206ENST00000494917 PSMG2Q969U7 264 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms