RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ABCG4Q9H172 646 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 NLRC4Q9NPP4 1024 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 NCKIPSDQ9NZQ3 722 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 RAI2Q9Y5P3 530 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 AQP9O43315 295 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 KDELR3O43731 214 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 GJB6O95452 261 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 UGT2B4P06133 528 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 UNGP13051 313 aaPredicted RBP23.58■■□□□ 1.37
COL27A1-208ENST00000494780 STAT1P42224 750 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 NSFP46459 744 aaKnown RBP23.58■■□□□ 1.37
COL27A1-208ENST00000494780 PFN3P60673 137 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 LSMEM2Q8N112 164 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 IFI44Q8TCB0 444 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 BTN2A2Q8WVV5 523 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 ZNF578Q96N58 590 aaPredicted RBP23.58■■□□□ 1.37
COL27A1-208ENST00000494780 KLHL32Q96NJ5 620 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 MAGEB5Q9BZ81 275 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 ADAM22Q9P0K1 906 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 KLF15Q9UIH9 416 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 GGT7Q9UJ14 662 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 ITM2BQ9Y287 266 aa23.58■■□□□ 1.37
COL27A1-208ENST00000494780 PTPRQQ9UMZ3 2332 aa23.58■■□□□ 1.36
COL27A1-208ENST00000494780 SMG1Q96Q15 3661 aaKnown RBP23.57■■□□□ 1.36
COL27A1-208ENST00000494780 TK2O00142 265 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 AREL1O15033 823 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 EPHB6O15197 1021 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 SPINT1O43278 529 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 JUNDP17535 347 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 RFC1P35251 1148 aaPredicted RBP23.57■■□□□ 1.36
COL27A1-208ENST00000494780 GDPD4Q6W3E5 623 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 LEKR1Q6ZMV7 388 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 SLFN11Q7Z7L1 901 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 MAPK15Q8TD08 544 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 CASKIN2Q8WXE0 1202 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 GDAP1L1Q96MZ0 367 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 FCRL3Q96P31 734 aaPredicted RBP23.57■■□□□ 1.36
COL27A1-208ENST00000494780 PCDHB18PQ96TA0 734 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 SELENOOQ9BVL4 669 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 SALL4Q9UJQ4 1053 aa23.57■■□□□ 1.36
COL27A1-208ENST00000494780 LOC400499M0QZD8 3231 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 TPP1O14773 563 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 BUB1O43683 1085 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 LZTS3O60299 673 aaPredicted RBP23.56■■□□□ 1.36
COL27A1-208ENST00000494780 CSO75390 466 aaKnown RBP23.56■■□□□ 1.36
COL27A1-208ENST00000494780 DXOO77932 396 aaKnown RBP23.56■■□□□ 1.36
COL27A1-208ENST00000494780 CALB1P05937 261 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 GPD1P21695 349 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 RAD51Q06609 339 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 CCDC173Q0VFZ6 552 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 EIF2B5Q13144 721 aaKnown RBP23.56■■□□□ 1.36
COL27A1-208ENST00000494780 PTK2BQ14289 1009 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 TPRG1LQ5T0D9 272 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 PHF13Q86YI8 300 aaPredicted RBP23.56■■□□□ 1.36
COL27A1-208ENST00000494780 ZNF248Q8NDW4 579 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 LMX1AQ8TE12 382 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 CENPTQ96BT3 561 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 SPASTQ9UBP0 616 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 SIK3Q9Y2K2 1263 aa23.56■■□□□ 1.36
COL27A1-208ENST00000494780 ATXN7O15265 892 aaPredicted RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 USP12O75317 370 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 TMCC1O94876 653 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 MPOP05164 745 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 LSSP48449 732 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 THOP1P52888 689 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 PCBP4P57723 403 aaKnown RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 GABREP78334 506 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 TLE3Q04726 772 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 CDKN3Q16667 212 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 CLEC16AQ2KHT3 1053 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 INO80DQ53TQ3 878 aaPredicted RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 ATXN7L2Q5T6C5 722 aaPredicted RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 WDR59Q6PJI9 974 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 TTC7BQ86TV6 843 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 ZNF354CQ86Y25 554 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 SPACA3Q8IXA5 215 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 RTL3Q8N8U3 475 aaKnown RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 LSM14AQ8ND56 463 aaKnown RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 C3orf20Q8ND61 904 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 LGMNQ99538 433 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 IL12RB2Q99665 862 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 C1QTNF7Q9BXJ2 289 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 TTYH3Q9C0H2 523 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 NOL6Q9H6R4 1146 aaKnown RBP23.55■■□□□ 1.36
COL27A1-208ENST00000494780 POLR1BQ9H9Y6 1135 aa23.55■■□□□ 1.36
COL27A1-208ENST00000494780 SIGLEC16A6NMB1 481 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 TOR1BO14657 336 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 IGSF6O95976 241 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 EPHB2P29323 1055 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 YBEYP58557 167 aaPredicted RBP23.54■■□□□ 1.36
COL27A1-208ENST00000494780 YPEL5P62699 121 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 DEFB133Q30KQ1 61 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 EFHC2Q5JST6 749 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 GPR155Q7Z3F1 870 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 TPCN2Q8NHX9 752 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 SLC39A7Q92504 469 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 HIC2Q96JB3 615 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 TBATAQ96M53 351 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 DKK3Q9UBP4 350 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 MFHAS1Q9Y4C4 1052 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms