RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 PABPC5Q96DU9 382 aaKnown RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 GPR78Q96P69 363 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 NDNQ99608 321 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 NOL6Q9H6R4 1146 aaKnown RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 GPAMQ9HCL2 828 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 SUFUQ9UMX1 484 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 ARHGEF37A1IGU5 675 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 A6NHS1 94 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TARM1B6A8C7 271 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CCNT2O60583 730 aaKnown RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CNTN5O94779 1100 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 COL6A2P12110 1019 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 HTR7P34969 479 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CD86P42081 329 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 FCGRTP55899 365 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TBX4P57082 545 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 USP46P62068 366 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 EFEMP1Q12805 493 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 PRKAA1Q13131 559 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 PDCD2Q16342 344 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 ZNF789Q5FWF6 425 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 PPM1LQ5SGD2 360 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TMEM198Q66K66 360 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 GLB1LQ6UWU2 654 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 FAM43BQ6ZT52 329 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 SAPCD2Q86UD0 394 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 MON1AQ86VX9 555 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 LSMEM2Q8N112 164 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 HEXDCQ8WVB3 486 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 ZNF184Q99676 751 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 NMRK2Q9NPI5 230 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TREX1Q9NSU2 369 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CORO1CQ9ULV4 474 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 DPPA5A6NC42 116 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 RPLP2P05387 115 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 JUNP05412 331 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 HMBSP08397 361 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 PIK3R1P27986 724 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 CRABP2P29373 138 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 ARPP19P56211 112 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 INHBEP58166 350 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 PRKCZQ05513 592 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 SLC10A7Q0GE19 358 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 CCNIQ14094 377 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 CSHL1Q14406 222 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 LRRC36Q1X8D7 754 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 ALFQ53S48 1182 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 RBM20Q5T481 1227 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 IZUMO2Q6UXV1 221 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 ACAD11Q709F0 780 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 MIB1Q86YT6 1006 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 FBXW8Q8N3Y1 598 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 C2CD4AQ8NCU7 369 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 HMCESQ96FZ2 354 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 MARK4Q96L34 752 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 CATSPER2Q96P56 530 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 ZIC5Q96T25 663 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 TBC1D13Q9NVG8 400 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 GMIPQ9P107 970 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 POMPQ9Y244 141 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 NEMP2A6NFY4 417 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 THRAP10827 490 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 PRDX6P30041 224 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 RENBPP51606 427 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 PRKAA2P54646 552 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 MRPS35P82673 323 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 ASPHQ12797 758 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 EML3Q32P44 896 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 TSTD2Q5T7W7 516 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 MARC1Q5VT66 337 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 IRGCQ6NXR0 463 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 PTAR1Q7Z6K3 402 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 DCP1BQ8IZD4 617 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 RTKNQ9BST9 563 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 SLC25A51Q9H1U9 297 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 TLR6Q9Y2C9 796 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
CHMP3-209ENST00000494623 TDRD15B5MCY1 1934 aaKnown RBP11.32□□□□□ -0.6
CHMP3-209ENST00000494623 RGSL1A5PLK6 1076 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 TMEM233B4DJY2 109 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 CCL22O00626 93 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 TADA2AO75478 443 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 SOAT2O75908 522 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 PEX11BO96011 259 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 CPB1P15086 417 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 PAX3P23760 479 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 ETFBP38117 255 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 NUDT2P50583 147 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 DSC2Q02487 901 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 PSMD5Q16401 504 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 MS4A13Q5J8X5 152 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 KIAA0930Q6ICG6 404 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-209ENST00000494623 AAGABQ6PD74 315 aa11.31□□□□□ -0.6
CHMP3-209ENST00000494623 KDELC1Q6UW63 502 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms