RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 GEMIN4P57678 1058 aaKnown RBP9.78□□□□□ -0.84
UBR4-216ENST00000494503 VAC14Q08AM6 782 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 ZNF805Q5CZA5 627 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 PERM1Q5SV97 790 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 TPRG1LQ5T0D9 272 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 CFAP58Q5T655 872 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 KIAA1614Q5VZ46 1190 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 ESRP1Q6NXG1 681 aaKnown RBP9.78□□□□□ -0.84
UBR4-216ENST00000494503 CCDC81Q6ZN84 652 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 RD3Q7Z3Z2 195 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 TTC7BQ86TV6 843 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 ZNF683Q8IZ20 524 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 NETO2Q8NC67 525 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 OR2AP1Q8NGE2 309 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
UBR4-216ENST00000494503 PGAP3Q96FM1 320 aaPredicted RBP9.78□□□□□ -0.84
UBR4-216ENST00000494503 HIC2Q96JB3 615 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 HAPLN3Q96S86 360 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 DPH1Q9BZG8 443 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 TCEAL2Q9H3H9 227 aaPredicted RBP9.78□□□□□ -0.84
UBR4-216ENST00000494503 NDST4Q9H3R1 872 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 EPB41L5Q9HCM4 733 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 SIX2Q9NPC8 291 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 SEPT11Q9NVA2 429 aaKnown RBP9.78□□□□□ -0.84
UBR4-216ENST00000494503 OR12D3Q9UGF7 316 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 KLF15Q9UIH9 416 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 U3KQA8 63 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 CFAP46Q8IYW2 2715 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 UNC13CQ8NB66 2214 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 IGLV3-10A0A075B6K4 115 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 AP1G1O43747 822 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 ZNF821O75541 412 aaPredicted RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 TM7SF2O76062 418 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 DXOO77932 396 aaKnown RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 LSM8O95777 96 aaKnown RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 MMEP08473 750 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 IGFALSP35858 605 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 RHOAP61586 193 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 PPARDQ03181 441 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 RAD51Q06609 339 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 EIF2B5Q13144 721 aaKnown RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 C15orf59Q2T9L4 293 aaPredicted RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 KLHL40Q2TBA0 621 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 VWA3BQ502W6 1294 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 GDPD4Q6W3E5 623 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 PRICKLE2Q7Z3G6 844 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 NOP9Q86U38 636 aaKnown RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 ZSCAN30Q86W11 494 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 HID1Q8IV36 788 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 MLKLQ8NB16 471 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 SCG3Q8WXD2 468 aaKnown RBP9.77□□□□□ -0.85
UBR4-216ENST00000494503 NAT6Q93015 286 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 TBC1D31Q96DN5 1066 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 GDAP1L1Q96MZ0 367 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 EPAS1Q99814 870 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 CCDC3Q9BQI4 270 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 C11orf70Q9BRQ4 267 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 TUBGCP2Q9BSJ2 902 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 LRRC61Q9BV99 259 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 OSBPL1AQ9BXW6 950 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 ASCL3Q9NQ33 180 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 NDFIP2Q9NV92 336 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 ENTPD2Q9Y5L3 495 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 CSNK1G3Q9Y6M4 447 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 ANKRD36A6QL64 1941 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 LRRK1Q38SD2 2015 aa9.77□□□□□ -0.85
UBR4-216ENST00000494503 ASH1LQ9NR48 2969 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 EME2A4GXA9 379 aaPredicted RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 CASC3O15234 703 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 SLC28A2O43868 658 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 GCATO75600 419 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 ZMPSTE24O75844 475 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 GFPT2O94808 682 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 TMCC1O94876 653 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 GJB6O95452 261 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 POP4O95707 220 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 IGSF6O95976 241 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 GSRP00390 522 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 TSHRP16473 764 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 SCNN1AP37088 669 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 EIF4A3P38919 411 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 GABRB2P47870 512 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 MAPKAPK2P49137 400 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 SYCP1Q15431 976 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 MYLK3Q32MK0 819 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 RAB6CQ53S08 254 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 TRNP1Q6NT89 227 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 SCYL2Q6P3W7 929 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 PCSK4Q6UW60 755 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 IRF2BP1Q8IU81 584 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 SLC35F3Q8IY50 421 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 DENND6BQ8NEG7 585 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 WDR36Q8NI36 951 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 PCDH19Q8TAB3 1148 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms