RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 RAD51Q06609 339 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 LLGL1Q15334 1064 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 IFI16Q16666 785 aaKnown RBP23.74■■□□□ 1.39
CLIC3-203ENST00000494426 DUOXA1Q1HG43 343 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 ODF2Q5BJF6 829 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 TRIM61Q5EBN2 209 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 TBC1D3GQ6DHY5 549 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 TBC1D3CQ6IPX1 549 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 SLC23A3Q6PIS1 610 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 SRLQ86TD4 932 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 NT5DC3Q86UY8 548 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 RFX6Q8HWS3 928 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 RCOR2Q8IZ40 523 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 TBC1D3Q8IZP1 549 aaPredicted RBP23.74■■□□□ 1.39
CLIC3-203ENST00000494426 MAK16Q9BXY0 300 aaKnown RBP23.74■■□□□ 1.39
CLIC3-203ENST00000494426 ANKRD36A6QL64 1941 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 DOCK9Q9BZ29 2069 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 PI4KAP42356 2102 aa23.74■■□□□ 1.39
CLIC3-203ENST00000494426 PTPRZ1P23471 2315 aaPredicted RBP23.73■■□□□ 1.39
CLIC3-203ENST00000494426 ADAMTS9Q9P2N4 1935 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 APOL1O14791 398 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 KHNYNO15037 678 aaKnown RBP23.73■■□□□ 1.39
CLIC3-203ENST00000494426 GDF9O60383 454 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 ZRANB2O95218 330 aaKnown RBP eCLIP23.73■■□□□ 1.39
CLIC3-203ENST00000494426 PIGNO95427 931 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 ADRB3P13945 408 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 CCNCP24863 283 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 CTNNA2P26232 953 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 CCR5P51681 352 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 NEK3P51956 506 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 ADCY2Q08462 1091 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 NPNTQ6UXI9 565 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 TEX26Q8N6G2 289 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 EXD1Q8NHP7 514 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.73■■□□□ 1.39
CLIC3-203ENST00000494426 SNX19Q92543 992 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 MAML1Q92585 1016 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 MIR1-1HGQ9H1L0 117 aa23.73■■□□□ 1.39
CLIC3-203ENST00000494426 PCDH15Q96QU1 1955 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 TTC24A2A3L6 582 aaPredicted RBP23.72■■□□□ 1.39
CLIC3-203ENST00000494426 MATN3O15232 486 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 CR2P20023 1033 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 CD27P26842 260 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 ABL2P42684 1182 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 CCDC15Q0P6D6 951 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 MARC1Q5VT66 337 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 FBXL19Q6PCT2 694 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 ZCCHC9Q8N567 271 aaKnown RBP23.72■■□□□ 1.39
CLIC3-203ENST00000494426 CEP76Q8TAP6 659 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 FATE1Q969F0 183 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 HDAC11Q96DB2 347 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 CAPN10Q9HC96 672 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 PREBQ9HCU5 417 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 FSCN3Q9NQT6 498 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 SLC6A14Q9UN76 642 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.72■■□□□ 1.39
CLIC3-203ENST00000494426 HEY1Q9Y5J3 304 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 CAPN6Q9Y6Q1 641 aa23.72■■□□□ 1.39
CLIC3-203ENST00000494426 hCG_1818297A0A087WSY0 165 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 A0A1W2PPC4 97 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 LNP1A1A4G5 178 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 SPINT1O43278 529 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 LATO43561 262 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 RNGTTO60942 597 aaKnown RBP23.71■■□□□ 1.39
CLIC3-203ENST00000494426 SERPINF2P08697 491 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 ZFXP17010 805 aaPredicted RBP23.71■■□□□ 1.39
CLIC3-203ENST00000494426 MX2P20592 715 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 SCNN1BP51168 640 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 RENBPP51606 427 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 DYNLT1P63172 113 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 HNRNPDQ14103 355 aaKnown RBP23.71■■□□□ 1.39
CLIC3-203ENST00000494426 ZNF235Q14590 738 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 TFDP3Q5H9I0 405 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 TRIM69Q86WT6 500 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 CAMK1DQ8IU85 385 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 RNF10Q8N5U6 811 aaKnown RBP23.71■■□□□ 1.39
CLIC3-203ENST00000494426 C12orf50Q8NA57 414 aaPredicted RBP23.71■■□□□ 1.39
CLIC3-203ENST00000494426 LGMNQ99538 433 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 MGME1Q9BQP7 344 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 SUV39H2Q9H5I1 410 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 DKK3Q9UBP4 350 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 SUSD2Q9UGT4 822 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 FADS3Q9Y5Q0 445 aa23.71■■□□□ 1.39
CLIC3-203ENST00000494426 A0A1B0GTW7 788 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 CCDC66A2RUB6 948 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 BCAT2O15382 392 aaPredicted RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 FOXD2O60548 495 aaPredicted RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 CST8O60676 142 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 CFIP05156 583 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 GNSP15586 552 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 TIMP2P16035 220 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 MMP13P45452 471 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 MAXP61244 160 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 LMNB2Q03252 620 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 PPIDQ08752 370 aaKnown RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 GRM3Q14832 879 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 KAZNQ674X7 775 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 TIGD7Q6NT04 549 aaPredicted RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 ZSWIM9Q86XI8 627 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 HCAR2Q8TDS4 363 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms