RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CEP192Q8TEP8 1941 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 MEI4A8MW99 385 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 MTSS1O43312 755 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 KIF5CO60282 957 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 RGRP47804 291 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 NEK3P51956 506 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 ADCY2Q08462 1091 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 ITKQ08881 620 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 RALGPS1Q5JS13 557 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 LYSMD4Q5XG99 296 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 AADACL2Q6P093 401 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 FBXL19Q6PCT2 694 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 ARMCX6Q7L4S7 300 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 CYP2U1Q7Z449 544 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 ZC3H18Q86VM9 953 aaKnown RBP12.63□□□□□ -0.39
TRA2A-209ENST00000494255 ABCA7Q8IZY2 2146 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 LRRN4Q8WUT4 740 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 TFB1MQ8WVM0 346 aaKnown RBP12.63□□□□□ -0.39
TRA2A-209ENST00000494255 HSPA12BQ96MM6 686 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 KLHL32Q96NJ5 620 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 NUDCD1Q96RS6 583 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 MGME1Q9BQP7 344 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 SEPT10Q9P0V9 454 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 AMACRQ9UHK6 382 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
TRA2A-209ENST00000494255 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-209ENST00000494255 PRR23AA6NEV1 266 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 C16orf96A6NNT2 1141 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 HACD1B0YJ81 288 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 H7C0C1 242 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 KCNK1O00180 336 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 MUSKO15146 869 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 INSIG1O15503 277 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 PIGNO95427 931 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 JCHAINP01591 159 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 XPAP23025 273 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-209ENST00000494255 SERPINA4P29622 427 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 ATP5OP48047 213 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 ADPRHP54922 357 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 IFI35P80217 286 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-209ENST00000494255 BCL2L1Q07817 233 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 XRCC4Q13426 336 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 AGBL4Q5VU57 503 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 DCAF12L1Q5VU92 463 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 NCEH1Q6PIU2 408 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 PGBD5Q8N414 524 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 OR2T34Q8NGX1 318 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF641Q96N77 438 aaPredicted RBP12.62□□□□□ -0.39
TRA2A-209ENST00000494255 HINFPQ9BQA5 517 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 POLR1EQ9GZS1 481 aaKnown RBP12.62□□□□□ -0.39
TRA2A-209ENST00000494255 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 DKK3Q9UBP4 350 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 PYCARDQ9ULZ3 195 aa12.62□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3DA0A087WVF3 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3IA0A087WXS9 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3EA0A087X179 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3KA0A087X1G2 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3FA6NER0 549 aaPredicted RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3LB9A6J9 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 KCNK3O14649 394 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 EPN2O95208 641 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 RETP07949 1114 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3HP0C7X1 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 ADRB3P13945 408 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 CES1P23141 567 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PLA2G5P39877 138 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 DPP6P42658 865 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PTGER3P43115 390 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 MAXP61244 160 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 CREB5Q02930 508 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PRKD1Q15139 912 aaPredicted RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 NOMO1Q15155 1222 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 WDR45BQ5MNZ6 344 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PIP5KL1Q5T9C9 394 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 KIAA0895LQ68EN5 471 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3GQ6DHY5 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3CQ6IPX1 549 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PARS2Q7L3T8 475 aaKnown RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TBC1D3Q8IZP1 549 aaPredicted RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 ACTL9Q8TC94 416 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 SNX19Q92543 992 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 RUBCNQ92622 972 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 RAB7BQ96AH8 199 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 FAM131CQ96AQ9 280 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 HERPUD2Q9BSE4 406 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 TLR10Q9BXR5 811 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 CARD9Q9H257 536 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PREBQ9HCU5 417 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms