RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ALDH1A3P47895 512 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 KPNA2P52292 529 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 ABCE1P61221 599 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 GNA12Q03113 381 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 SEPT6Q14141 434 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 PCSK7Q16549 785 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 TSNAXIP1Q2TAA8 658 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 NEPROQ6NW34 567 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 PLD6Q8N2A8 252 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF689Q96CS4 500 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 FBXO5Q9UKT4 447 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 RIMKLBQ9ULI2 386 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 YIPF1Q9Y548 306 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 MIA3Q5JRA6 1907 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 A0A087X1B8 175 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 MROH6A6NGR9 719 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 FCHO1O14526 889 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 COCHO43405 550 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 EFCAB14O75071 495 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 UPP2O95045 317 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 MYL4P12829 197 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 LAG3P18627 525 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 GABRB3P28472 473 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 CHRNA4P43681 627 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 HK2P52789 917 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 AQP5P55064 265 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 RAB10P61026 200 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 POU4F1Q01851 419 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ZCCHC23Q6ZST2 131 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 RAPH1Q70E73 1250 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 SETD3Q86TU7 594 aaPredicted RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 PGBD5Q8N414 524 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 PTCD3Q96EY7 689 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 C1QTNF1Q9BXJ1 281 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 C20orf27Q9GZN8 174 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 CAB39LQ9H9S4 337 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 UXTQ9UBK9 157 aaPredicted RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 STK39Q9UEW8 545 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 PCDHB12Q9Y5F1 795 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 MYLKQ15746 1914 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 FAM95CA0A1B0GW59 222 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 G3V2L1 256 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 WFS1O76024 890 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 SEC24AO95486 1093 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 STMN1P16949 149 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 RPL17P18621 184 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 CES1P23141 567 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC6A4P31645 630 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ACVRL1P37023 503 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ETFBP38117 255 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC1A2P43004 574 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 CLCN5P51795 746 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 MAXP61244 160 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 RAB33AQ14088 237 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF470Q6ECI4 717 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ZYG11AQ6WRX3 759 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 CIR1Q86X95 450 aaPredicted RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 MGME1Q9BQP7 344 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 MFSD1Q9H3U5 465 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 RC3H2Q9HBD1 1191 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 DNAJC28Q9NX36 388 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC2A6Q9UGQ3 507 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 SEPT3Q9UH03 358 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 DNAJC16Q9Y2G8 782 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ACOT9Q9Y305 439 aa10.9□□□□□ -0.66
PHACTR4-204ENST00000493669 ILVBLA1L0T0 632 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 H3BNC9 293 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 GOLGA8TH3BQL2 631 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 CHUKO15111 745 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 TRIM13O60858 407 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 CBX6O95503 412 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 ATXN1LP0C7T5 689 aaKnown RBP10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 SLC35E2BP0CK96 405 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 HOXD9P28356 352 aaPredicted RBP10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 LEPRP48357 1165 aaKnown RBP10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 ACVR1Q04771 509 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 ASPHQ12797 758 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 DLG2Q15700 870 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF783Q6ZMS7 281 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 SLC25A41Q8N5S1 370 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 MYEOVQ96EZ4 313 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 SORT1Q99523 831 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 SEMA3CQ99985 751 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 ATXN3LQ9H3M9 355 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 TRIM33Q9UPN9 1127 aa10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 MRPL42Q9Y6G3 142 aaKnown RBP10.9□□□□□ -0.67
PHACTR4-204ENST00000493669 CCDC78A2IDD5 438 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 KDELR3O43731 214 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 STC2O76061 302 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 SNUPNO95149 360 aaKnown RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 GJB5O95377 273 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 SERPINA6P08185 405 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 SERPINF2P08697 491 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms