RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 KCND1Q9NSA2 647 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 ZNF212Q9UDV6 495 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM39A-211ENST00000491685 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 ENC1O14682 589 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 MCF2LO15068 1137 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 SLC7A4O43246 635 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 SRGAP2O75044 1071 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 SDC3O75056 442 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 MTA2O94776 668 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 PROSCO94903 275 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 KRT7P08729 469 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 PRLRP16471 622 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 HTR7P34969 479 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 ACADVLP49748 655 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 HDAC4P56524 1084 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 SMAD1Q15797 465 aaKnown RBP11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 FAM46CQ5VWP2 391 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 BNIPLQ7Z465 357 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 TRIM69Q86WT6 500 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 SYCE1Q8N0S2 351 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 RNF10Q8N5U6 811 aaKnown RBP11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 OR7D4Q8NG98 312 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 OR2A12Q8NGT7 310 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 KLK6Q92876 244 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 ARHGEF26Q96DR7 871 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 CATSPERBQ9H7T0 1116 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 FZD3Q9NPG1 666 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 HS3ST2Q9Y278 367 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 ACTL7AQ9Y615 435 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 LRRK1Q38SD2 2015 aa11.23□□□□□ -0.61
TMEM39A-211ENST00000491685 IGLV3-10A0A075B6K4 115 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 TRABD2BA6NFA1 517 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 EIF4E1BA6NMX2 242 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 DRGXA6NNA5 263 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 E9PAM4 449 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 C1QTNF3-AMACRE9PGA6 284 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ALOX15BO15296 676 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 PJA2O43164 708 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 KALRNO60229 2985 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 MAGEC1O60732 1142 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 RNGTTO60942 597 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ZNF821O75541 412 aaPredicted RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ZIC2O95409 532 aaPredicted RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 LDOC1O95751 146 aaPredicted RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 TUBB4AP04350 444 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ITGAVP06756 1048 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 CDK4P11802 303 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 MIPP30301 263 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 L1CAMP32004 1257 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 MAN1A1P33908 653 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ARL4AP40617 200 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 CETN2P41208 172 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 HADHBP55084 474 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 OGDHQ02218 1023 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 CYP4F3Q08477 520 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 RWDD4Q6NW29 188 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 C22orf39Q6P5X5 142 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 TMEM139Q8IV31 216 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 OXR1Q8N573 874 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 DCAF4L2Q8NA75 395 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 KCTD6Q8NC69 237 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 KIAA1524Q8TCG1 905 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 GRIN3AQ8TCU5 1115 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 CRELD1Q96HD1 420 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 EPAS1Q99814 870 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 TRPM6Q9BX84 2022 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 MAK16Q9BXY0 300 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ZYG11BQ9C0D3 744 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 TNKS2Q9H2K2 1166 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 DHX35Q9H5Z1 703 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ZWILCHQ9H900 591 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 PPARGC1AQ9UBK2 798 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 FZD10Q9ULW2 581 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 ADGRG1Q9Y653 693 aa11.22□□□□□ -0.61
TMEM39A-211ENST00000491685 A0A1W2PQU0 124 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 GOLGA6L9A6NEM1 432 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 KPNA3O00505 521 aaPredicted RBP11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 SPOPO43791 374 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 RFPL3O75679 317 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 ZMPSTE24O75844 475 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 CHRNA3P32297 505 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 HCAR3P49019 387 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 ARF5P84085 180 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 NRG1Q02297 640 aaPredicted RBP11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 KRT81Q14533 505 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 C6orf118Q5T5N4 469 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 SEL1L3Q68CR1 1132 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 ZNF662Q6ZS27 426 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 DAAM2Q86T65 1068 aa11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
TMEM39A-211ENST00000491685 RHOT1Q8IXI2 618 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms