RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ABI3BPQ7Z7G0 1075 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 SLFN11Q7Z7L1 901 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 VPS36Q86VN1 386 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 ZNF677Q86XU0 584 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 MCOLN2Q8IZK6 566 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 PELI3Q8N2H9 469 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 PCDH20Q8N6Y1 951 aaKnown RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 NPWQ8N729 165 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 OR2AP1Q8NGE2 309 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 LRRN4Q8WUT4 740 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 APOLD1Q96LR9 279 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 SMIM14Q96QK8 99 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 HDAC8Q9BY41 377 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 SLC39A8Q9C0K1 460 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 KDM4CQ9H3R0 1056 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 ERVMER34-1Q9H9K5 563 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 DMTF1Q9Y222 760 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 AK5Q9Y6K8 562 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 CHD6Q8TD26 2715 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 ITPR1Q14643 2758 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 GOLGA4Q13439 2230 aaKnown RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 SIGLEC16A6NMB1 481 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 RASA4BC9J798 803 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 K7ESM1 405 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 MUSKO15146 869 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 RASA4O43374 803 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 KDELR3O43731 214 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 BRINP1O60477 761 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 BUB1BO60566 1050 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 MPOP05164 745 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 TIMP2P16035 220 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 TGM2P21980 687 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 AKT2P31751 481 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 DAB2P98082 770 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 KIF26BQ2KJY2 2108 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 MYLK3Q32MK0 819 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 PERM1Q5SV97 790 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 ACAD10Q6JQN1 1059 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 GUSBP11Q6P575 273 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 GDPD4Q6W3E5 623 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 ARCQ7LC44 396 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 ZNF571Q7Z3V5 609 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 GALNT15Q8N3T1 639 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 RTL3Q8N8U3 475 aaKnown RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 ZNF548Q8NEK5 533 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 OR4C6Q8NH72 309 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 SKA1Q96BD8 255 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 BTBD6Q96KE9 485 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 ERGIC2Q96RQ1 377 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 KCTD15Q96SI1 283 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 SNRNP25Q9BV90 132 aaKnown RBP9.03□□□□□ -0.96
HDAC3-211ENST00000491581 CEP44Q9C0F1 390 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 CLPBQ9H078 707 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 PDFQ9HBH1 243 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 GPR27Q9NS67 375 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 KLHL11Q9NVR0 708 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 ANO10Q9NW15 660 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 MYO1AQ9UBC5 1043 aa9.03□□□□□ -0.96
HDAC3-211ENST00000491581 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.96
HDAC3-211ENST00000491581 CPED1A4D0V7 1026 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 A6NNZ2 444 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 DDX3XO00571 662 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 NEMP1O14524 444 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 AREL1O15033 823 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 DFNA5O60443 496 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ACP1P24666 158 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 MAPKAPK2P49137 400 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ZNF143P52747 638 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 RHOAP61586 193 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 RPS21P63220 83 aaKnown RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 NRG1Q02297 640 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 CCDC173Q0VFZ6 552 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ZNF211Q13398 564 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 MAMLD1Q13495 774 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 SERINC3Q13530 473 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 IRF4Q15306 451 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 KLHL40Q2TBA0 621 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ARL13BQ3SXY8 428 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ZNF805Q5CZA5 627 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 CAVIN1Q6NZI2 390 aaKnown RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ZNF783Q6ZMS7 281 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 TRIM72Q6ZMU5 477 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 TTC7BQ86TV6 843 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 IQCHQ86VS3 1027 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 TMPRSS12Q86WS5 348 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 CAMK1DQ8IU85 385 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 ARHGAP12Q8IWW6 846 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 PDCD7Q8N8D1 485 aaKnown RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 TP53I13Q8NBR0 393 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 PLA2G15Q8NCC3 412 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 TSEN2Q8NCE0 465 aaKnown RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 MSANTD4Q8NCY6 345 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 LMX1AQ8TE12 382 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 TSACCQ96A04 125 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-211ENST00000491581 NTAN1Q96AB6 310 aa9.02□□□□□ -0.97
HDAC3-211ENST00000491581 CENPTQ96BT3 561 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms