RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	ACAD9	Q9H845	621 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ASIC5	Q9NY37	505 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	OSGIN1	Q9UJX0	560 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	SLC35F4	A4IF30	521 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	CST8	O60676	142 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	CLPX	O76031	633 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ITGAM	P11215	1152 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	FCGR1A	P12314	374 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	TCN1	P20061	433 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	GPX3	P22352	226 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	MIP	P30301	263 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	EIF3E	P60228	445 aa	Known RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	NRG1	Q02297	640 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ITGA7	Q13683	1181 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	KIZ	Q2M2Z5	673 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	NCBP2-AS2	Q69YL0	99 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	AMIGO2	Q86SJ2	522 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ITIH5	Q86UX2	942 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	SNX31	Q8N9S9	440 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	S100Z	Q8WXG8	99 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PEX13	Q92968	403 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	THAP11	Q96EK4	314 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	CSRNP1	Q96S65	589 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PI4K2A	Q9BTU6	479 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	HOXD1	Q9GZZ0	328 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	TM9SF3	Q9HD45	589 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	CNOT6	Q9ULM6	557 aa	Known RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	USP18	Q9UMW8	372 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ERVK-11	Q9UQG0	969 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	GINS2	Q9Y248	185 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	RBMX2	Q9Y388	322 aa	Known RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541		A0A0A0MRY4	1105 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	SERTM1	A2A2V5	107 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	NDUFS2	O75306	463 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	CACNB3	P54284	484 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	PRAME	P78395	509 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	PPP2R5D	Q14738	602 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	TMEM53	Q6P2H8	277 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	C10orf107	Q8IVU9	208 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	PPP4R1	Q8TF05	950 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	NTAN1	Q96AB6	310 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	SPATA13	Q96N96	652 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	WDR12	Q9GZL7	423 aa	Known RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	SAE1	Q9UBE0	346 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	ANAPC2	Q9UJX6	822 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	MCM3AP	O60318	1980 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	CLRN2	A0PK11	232 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	FAM47E-STBD1	D6RA91	191 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	MAF	O75444	373 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	TAL1	P17542	331 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	TCF7	P36402	384 aa	Predicted RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	ENTPD1	P49961	510 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	PRKCQ	Q04759	706 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	TRPC3	Q13507	836 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	BMPR2	Q13873	1038 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	MAPRE2	Q15555	327 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	ITPRIPL1	Q6GPH6	555 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	STYK1	Q6J9G0	422 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	SNX20	Q7Z614	316 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	JOSD2	Q8TAC2	188 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	MAGED4	Q96JG8	741 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	EHD1	Q9H4M9	534 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	QTRT2	Q9H974	415 aa	Known RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	ARNT2	Q9HBZ2	717 aa		10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.4	□□□□□ -0.74
SREBF2-208	ENST00000491541	AIM2	O14862	343 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	DCLK1	O15075	740 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	CYP3A5	P20815	502 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	RPL14	P50914	215 aa	Known RBP	10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	BMX	P51813	675 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	BST2	Q10589	180 aa	Known RBP	10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	RAB39A	Q14964	217 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	DNAJC24	Q6P3W2	148 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	LBX2	Q6XYB7	198 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	ANKK1	Q8NFD2	765 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	RMND5B	Q96G75	393 aa	Predicted RBP	10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	NUF2	Q9BZD4	464 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	TBC1D23	Q9NUY8	699 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	DTL	Q9NZJ0	730 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	SIX4	Q9UIU6	781 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	CLEC11A	Q9Y240	323 aa		10.4	□□□□□ -0.75
SREBF2-208	ENST00000491541	TAF4	O00268	1085 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	CYB561D2	O14569	222 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	MCF2L	O15068	1137 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	FOXD2	O60548	495 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	MX2	P20592	715 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	M6PR	P20645	277 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	MLLT10	P55197	1068 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	EXOC8	Q8IYI6	725 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	C1orf52	Q8N6N3	182 aa	Known RBP	10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	SPPL2B	Q8TCT7	592 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	SLC2A14	Q8TDB8	520 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	ATL1	Q8WXF7	558 aa		10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	AURKB	Q96GD4	344 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	ZNF512	Q96ME7	567 aa	Predicted RBP	10.39	□□□□□ -0.75
SREBF2-208	ENST00000491541	MCEE	Q96PE7	176 aa		10.39	□□□□□ -0.75

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