RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 H0Y3Z8 333 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 APOL1O14791 398 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 ACSL4O60488 711 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 FAM155BO75949 473 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 C1QAP02745 245 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 SNRPAP09012 282 aaKnown RBP23.11■■□□□ 1.29
USF3-203ENST00000491165 SGSHP51688 502 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 KRT72Q14CN4 511 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 ZNF77Q15935 545 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 PCDH19Q8TAB3 1148 aa23.11■■□□□ 1.29
USF3-203ENST00000491165 FBXO6Q9NRD1 293 aaPredicted RBP23.11■■□□□ 1.29
USF3-203ENST00000491165 NUP205Q92621 2012 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 SOBPA7XYQ1 873 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 FCARP24071 287 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 LGSNQ5TDP6 509 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 FBXL22Q6P050 247 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 PQLC3Q8N755 202 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 IGSF8Q969P0 613 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 RIPOR3Q96MK2 946 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 HEY1Q9Y5J3 304 aa23.1■■□□□ 1.29
USF3-203ENST00000491165 E9PAM4 449 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 GYG2O15488 501 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 RBL1P28749 1068 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 HTR3DQ70Z44 454 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 NETO2Q8NC67 525 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 C1orf74Q96LT6 269 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 PRICKLE1Q96MT3 831 aaPredicted RBP23.09■■□□□ 1.29
USF3-203ENST00000491165 ZNF670Q9BS34 389 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 MPP6Q9NZW5 540 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 CDH7Q9ULB5 785 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 BCLAF3A2AJT9 711 aaKnown RBP23.09■■□□□ 1.29
USF3-203ENST00000491165 GSC2O15499 205 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 MYL2P10916 166 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 AMPD1P23109 780 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 PRKCHP24723 683 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 PTDSS1P48651 473 aaKnown RBP23.09■■□□□ 1.29
USF3-203ENST00000491165 BLMHQ13867 455 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 RFX8Q6ZV50 586 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 TRIM42Q8IWZ5 723 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 TEX9Q8N6V9 391 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 CFAP61Q8NHU2 1237 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 OXNAD1Q96HP4 312 aaPredicted RBP23.09■■□□□ 1.29
USF3-203ENST00000491165 ARHGEF4Q9NR80 690 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 GDE1Q9NZC3 331 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 STOML2Q9UJZ1 356 aa23.09■■□□□ 1.29
USF3-203ENST00000491165 EEF2KO00418 725 aaKnown RBP23.08■■□□□ 1.29
USF3-203ENST00000491165 MTHFRP42898 656 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 MAGEA6P43360 314 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 USP4Q13107 963 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 DPYSQ14117 519 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 CMPK2Q5EBM0 449 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 FAXCQ5TGI0 409 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 CDHR3Q6ZTQ4 885 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 CAND1Q86VP6 1230 aaKnown RBP23.08■■□□□ 1.29
USF3-203ENST00000491165 CIR1Q86X95 450 aaPredicted RBP23.08■■□□□ 1.29
USF3-203ENST00000491165 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.08■■□□□ 1.29
USF3-203ENST00000491165 SMARCD2Q92925 531 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 PRR11Q96HE9 360 aaPredicted RBP23.08■■□□□ 1.29
USF3-203ENST00000491165 NDFIP2Q9NV92 336 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 ZMYM5Q9UJ78 669 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 SH3BP1Q9Y3L3 701 aa23.08■■□□□ 1.29
USF3-203ENST00000491165 CXorf49A8MYA2 514 aaPredicted RBP23.08■■□□□ 1.28
USF3-203ENST00000491165 APRTP07741 180 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 TACR2P21452 398 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 ALFQ53S48 1182 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 ADGRF1Q5T601 910 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 SLC9A4Q6AI14 798 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 CFAP52Q8N1V2 620 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 MCUR1Q96AQ8 359 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 LRRC39Q96DD0 335 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 PLLPQ9Y342 182 aa23.08■■□□□ 1.28
USF3-203ENST00000491165 SMNDC1O75940 238 aaKnown RBP eCLIP23.07■■□□□ 1.28
USF3-203ENST00000491165 CNTN5O94779 1100 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 MAP3K6O95382 1288 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 GSTA2P09210 222 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 ESRRAP11474 423 aaPredicted RBP23.07■■□□□ 1.28
USF3-203ENST00000491165 PAX7P23759 505 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 SLC11A2P49281 568 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 TPI1P60174 286 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 KHDC1Q4VXA5 237 aaKnown RBP23.07■■□□□ 1.28
USF3-203ENST00000491165 FAM182AQ5T1J6 154 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 FAM91A1Q658Y4 838 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 TRIM68Q6AZZ1 485 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 TANGO2Q6ICL3 276 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 FGF14Q92915 247 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 AZIN2Q96A70 460 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 LINC00597Q9H2U6 94 aa23.07■■□□□ 1.28
USF3-203ENST00000491165 KIF26AQ9ULI4 1882 aaPredicted RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 FCHO1O14526 889 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 MBTPS2O43462 519 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 LAMP2P13473 410 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 ATP6V1C1P21283 382 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 ARL4AP40617 200 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 CCNFP41002 786 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 ABL2P42684 1182 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 RPS24P62847 133 aaKnown RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 NRG1Q02297 640 aaPredicted RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 TSNAXIP1Q2TAA8 658 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 RWDD4Q6NW29 188 aaKnown RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 TP53INP2Q8IXH6 220 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms