RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ITIH6Q6UXX5 1313 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 SAC3D1A6NKF1 404 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 SPTLC2O15270 562 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 RTN3O95197 1032 aaPredicted RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 KAT7O95251 611 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 LDHCP07864 332 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 CYP3A4P08684 503 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 HKR1P10072 659 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 MYCLP12524 364 aaPredicted RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 ABCD3P28288 659 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 PAFAH1B1P43034 410 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 AGTR2P50052 363 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 CDK18Q07002 472 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 VGLL4Q14135 290 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 KRT32Q14532 448 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 RUNDC3AQ59EK9 446 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 GPATCH4Q5T3I0 446 aaKnown RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 HAUS3Q68CZ6 603 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 KIAA0895LQ68EN5 471 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 DSTYKQ6XUX3 929 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 KYAT3Q6YP21 454 aaKnown RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 C4orf50Q6ZRC1 276 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 LRRC8DQ7L1W4 858 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 WDR53Q7Z5U6 358 aaPredicted RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 ANKRD23Q86SG2 305 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 HS6ST2Q96MM7 605 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 MMS19Q96T76 1030 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 BARD1Q99728 777 aaKnown RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 FSD1LQ9BXM9 530 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 CIPCQ9C0C6 399 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 MROH8Q9H579 483 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 IL21RQ9HBE5 538 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 RXFP3Q9NSD7 469 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 SUFUQ9UMX1 484 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 CNPY2Q9Y2B0 182 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 GDAQ9Y2T3 454 aa5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 COPG1Q9Y678 874 aaKnown RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 RPAP1Q9BWH6 1393 aaPredicted RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 IBTKQ9P2D0 1353 aaPredicted RBP5.27□□□□□ -1.57
SSX2IP-208ENST00000490476 ZNF521Q96K83 1311 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 A0A1W2PPH5 198 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 EPOPA6NHQ4 379 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 FYB1O15117 783 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 BBOX1O75936 387 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 MBPP02686 304 aaPredicted RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 MATN1P21941 496 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SLC8A1P32418 973 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 PSMC2P35998 433 aaKnown RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 GRIA3P42263 894 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 VPS41P49754 854 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 CCT8P50990 548 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 ZXDAP98168 799 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 GOLGA8FQ08AF8 430 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 MPP3Q13368 585 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 FOXE3Q13461 319 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 TSTQ16762 297 aaKnown RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 RNASE12Q5GAN4 147 aaKnown RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 C1orf141Q5JVX7 400 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 FAM69AQ5T7M9 428 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 LIPMQ5VYY2 423 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 DENND1BQ6P3S1 775 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SLC39A5Q6ZMH5 540 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SPRED1Q7Z699 444 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 VRK3Q8IV63 474 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SFTPA1Q8IWL2 248 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SRFBP1Q8NEF9 429 aaKnown RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 TBC1D22AQ8WUA7 517 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 TRIB2Q92519 343 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 AKAP1Q92667 903 aaKnown RBP eCLIP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 ZBTB10Q96DT7 871 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 EDC3Q96F86 508 aaKnown RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 APOPT1Q96IL0 206 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SNX18Q96RF0 628 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 EYA3Q99504 573 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 MACROD1Q9BQ69 325 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 ADGRE3Q9BY15 652 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 ZNF341Q9BYN7 854 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 OSBPL5Q9H0X9 879 aaPredicted RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 MMRN2Q9H8L6 949 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 THAP1Q9NVV9 213 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 ORC3Q9UBD5 711 aaPredicted RBP5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 CAMK2AQ9UQM7 478 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 CYP46A1Q9Y6A2 500 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 SCINQ9Y6U3 715 aa5.26□□□□□ -1.57
SSX2IP-208ENST00000490476 MAST3O60307 1309 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 SALL3Q9BXA9 1300 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 SIP14410 1827 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 TICRRQ7Z2Z1 1910 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 DOPEY2Q9Y3R5 2298 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 NAV3Q8IVL0 2385 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 C3orf70A6NLC5 250 aaPredicted RBP5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 SRRM3A6NNA2 597 aaPredicted RBP5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 DNM1LO00429 736 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 SYN3O14994 580 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 ORC4O43929 436 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 TJP3O95049 919 aa5.25□□□□□ -1.57
SSX2IP-208ENST00000490476 CLTBP09497 229 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms