RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ASNSD1	Q9NWL6	643 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	HOXC10	Q9NYD6	342 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	RAB21	Q9UL25	225 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TRPC5	Q9UL62	973 aa	Predicted RBP	2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	RCE1	Q9Y256	329 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM5	Q9Y2B1	443 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	TRIM17	Q9Y577	477 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	SNX8	Q9Y5X2	465 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	ATAD2B	Q9ULI0	1458 aa		2.69	□□□□□ -1.98
PUM3-204	ENST00000490444	FLT1	P17948	1338 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	WDR17	Q8IZU2	1322 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	MBD3L5	A6NJ08	208 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	PI4K2B	G5E9Z4	385 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444		H0YC42	278 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	DDX39A	O00148	427 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	GTPBP1	O00178	669 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SOCS2	O14508	198 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CAPN9	O14815	690 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	PSMA7	O14818	248 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ZBTB43	O43298	467 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	PTP4A3	O75365	173 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	TSPAN9	O75954	239 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SNX4	O95219	450 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ATP5B	P06576	529 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ADRB2	P07550	413 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	PC	P11498	1178 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	TNNT1	P13805	278 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	GAP43	P17677	238 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	HLA-DPA1	P20036	260 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	IL11	P20809	199 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	MAPK3	P27361	379 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	HOXA7	P31268	230 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ALDH3A2	P51648	485 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CCR9	P51686	369 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC37A1	P57057	533 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	NLRP5	P59047	1200 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	YPEL5	P62699	121 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	IFI35	P80217	286 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	MECOM	Q03112	1051 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ZBTB16	Q05516	673 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	TFCP2	Q12800	502 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	BFSP1	Q12934	665 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CHAF1B	Q13112	559 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF674	Q2M3X9	581 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	WSCD2	Q2TBF2	565 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CERKL	Q49MI3	558 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ATPAF1	Q5TC12	328 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	NAA16	Q6N069	864 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	WDR93	Q6P2C0	686 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	KLHL17	Q6TDP4	642 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	IL27RA	Q6UWB1	636 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC39A5	Q6ZMH5	540 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	RAB11FIP2	Q7L804	512 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	NUP54	Q7Z3B4	507 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	MRPL10	Q7Z7H8	261 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CHD1L	Q86WJ1	897 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	HERC6	Q8IVU3	1022 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	RPAP2	Q8IXW5	612 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ANKRD20A12P	Q8NF67	263 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	MOSPD2	Q8NHP6	518 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CEP70	Q8NHQ1	597 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	GDAP1	Q8TB36	358 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SPPL3	Q8TCT6	385 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	NSMCE1	Q8WV22	266 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF606	Q8WXB4	792 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	HERVK_113	Q902F9	699 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ST8SIA4	Q92187	359 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	USP6NL	Q92738	828 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ITFG2	Q969R8	447 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	RILPL2	Q969X0	211 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	BICD1	Q96G01	975 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	REXO5	Q96IC2	774 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	C16orf45	Q96MC5	204 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF830	Q96NB3	372 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	FAM210A	Q96ND0	272 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	RUNDC3B	Q96NL0	473 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	GPR78	Q96P69	363 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	GSDMA	Q96QA5	445 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	FCRL5	Q96RD9	977 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	FNBP1	Q96RU3	617 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	HGH1	Q9BTY7	390 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	TEX13B	Q9BXU2	312 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	AGXT2	Q9BYV1	514 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CCDC134	Q9H6E4	229 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	RPAP3	Q9H6T3	665 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SYNC	Q9H7C4	482 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	IL21R	Q9HBE5	538 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	G6PC2	Q9NQR9	355 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	EIF2B3	Q9NR50	452 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	INTS10	Q9NVR2	710 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	TRNAU1AP	Q9NX07	287 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	UTP6	Q9NYH9	597 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	C6orf203	Q9P0P8	240 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF624	Q9P2J8	865 aa	Predicted RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CGN	Q9P2M7	1197 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	KLHL13	Q9P2N7	655 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	LAMP5	Q9UJQ1	280 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	CFAP45	Q9UL16	551 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	COG5	Q9UP83	839 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC12A4	Q9UP95	1085 aa		2.68	□□□□□ -1.98

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