RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 MATN1P21941 496 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TCEA1P23193 301 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TXKP42681 527 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 CHRNA4P43681 627 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 KRT6CP48668 564 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 RAD23BP54727 409 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 EFNB1P98172 346 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 IL11RAQ14626 422 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 USP10Q14694 798 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PTPN14Q15678 1187 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ALG11Q2TAA5 492 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 SMU1Q2TAY7 513 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 MYLK3Q32MK0 819 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ZC3H14Q6PJT7 736 aaKnown RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PAQR4Q8N4S7 273 aaPredicted RBP3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PSD4Q8NDX1 1056 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 ARRDC3Q96B67 414 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PNKPQ96T60 521 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 TBC1D23Q9NUY8 699 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 THAP1Q9NVV9 213 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 COMMD8Q9NX08 183 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 NENFQ9UMX5 172 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 PLEKHA6Q9Y2H5 1048 aa3.08□□□□□ -1.92
UBXN4-208ENST00000490163 MON2Q7Z3U7 1717 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 NLRP1Q9C000 1473 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 RAB3GAP2Q9H2M9 1393 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FMN2Q9NZ56 1722 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 A0A0U1RQS6 177 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FAM90A10PA6NDY2 464 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 MYO1GB0I1T2 1018 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PTGES3LE9PB15 166 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 M0QYT0 321 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ZC3H11AO75152 810 aaKnown RBP eCLIP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 RNASE1P07998 156 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 MYBL1P10243 752 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CD19P15391 556 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CD6P30203 668 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PBX1P40424 430 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FASLGP48023 281 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 SP2Q02086 613 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PPARDQ03181 441 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 RNASELQ05823 741 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 DMWDQ09019 674 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 LMAN2Q12907 356 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 SGO1Q5FBB7 561 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FAM69AQ5T7M9 428 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 MFSD4BQ5TF39 518 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ASPHD1Q5U4P2 390 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CASC1Q6TDU7 716 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FAM83AQ86UY5 434 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 TIGD4Q8IY51 512 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FBXW8Q8N3Y1 598 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 SRBD1Q8N5C6 995 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 METTL25Q8N6Q8 603 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ALG3Q92685 438 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 TNPO1Q92973 898 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CUL5Q93034 780 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 NACC2Q96BF6 587 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CCDC43Q96MW1 224 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CMTM3Q96MX0 182 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 IWS1Q96ST2 819 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 GPA33Q99795 319 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 SPRY4Q9C004 299 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 DEF6Q9H4E7 631 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 POLR1BQ9H9Y6 1135 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 CHCHD3Q9NX63 227 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 STEAP1Q9UHE8 339 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 KCNE5Q9UJ90 142 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ITSN1Q15811 1721 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ABCA3Q99758 1704 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 TEX51A0A1B0GUA7 166 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 OR10H2O60403 315 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 HLA-DOAP06340 250 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PCP11498 1178 aaKnown RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 DNAJB1P25685 340 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ARL4AP40617 200 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 NPY4RP50391 375 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ZNF81P51508 661 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 GRM1Q13255 1194 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 GALNT17Q6IS24 598 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 Q6ZSN1 163 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PNPLA1Q8N8W4 532 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FAM46DQ8NEK8 389 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 EDAQ92838 391 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 SLC41A2Q96JW4 573 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FAM84AQ96KN4 292 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 LINC00615Q96LM1 132 aaPredicted RBP3.07□□□□□ -1.92
UBXN4-208ENST00000490163 MUS81Q96NY9 551 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PCYT2Q99447 389 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 MPHOSPH9Q99550 1183 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 PIP5K1AQ99755 562 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 THAP2Q9H0W7 228 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FETUBQ9UGM5 382 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ADAMTS8Q9UP79 889 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 FPGT-TNNI3KV9GXZ4 949 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 RALGAPBQ86X10 1494 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 ANKRD30BQ9BXX2 1392 aa3.07□□□□□ -1.92
UBXN4-208ENST00000490163 A0A0U1RQK1 487 aa3.06□□□□□ -1.92
UBXN4-208ENST00000490163 ZNF320A2RRD8 509 aa3.06□□□□□ -1.92
UBXN4-208ENST00000490163 SPRY1O43609 319 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms