RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 PFN3P60673 137 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 SLC25A11Q02978 314 aaKnown RBP12□□□□□ -0.49
SRSF4-204ENST00000489898 SLC20A2Q08357 652 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
SRSF4-204ENST00000489898 OVGP1Q12889 678 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 FZD2Q14332 565 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 CYTH1Q15438 398 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 KLHL40Q2TBA0 621 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 RWDD4Q6NW29 188 aaKnown RBP12□□□□□ -0.49
SRSF4-204ENST00000489898 DHRS13Q6UX07 377 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 ADAT2Q7Z6V5 191 aaKnown RBP12□□□□□ -0.49
SRSF4-204ENST00000489898 LUZP1Q86V48 1076 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 MDM1Q8TC05 714 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 RFFLQ8WZ73 363 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 VCPIP1Q96JH7 1222 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 EXOC2Q96KP1 924 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 ZDHHC6Q9H6R6 413 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 AP4E1Q9UPM8 1137 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 BAHCC1Q9P281 2608 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 C16orf96A6NNT2 1141 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 TMCO5BA8MYB1 307 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 ENC1O14682 589 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 YKT6O15498 198 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 PRAMEF11O60813 436 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 PIAS2O75928 621 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 UGT2B4P06133 528 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 GZMAP12544 262 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 SKILP12757 684 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 EPHB2P29323 1055 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 MIPP30301 263 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 C21orf59P57076 290 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 IHHQ14623 411 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 POLD3Q15054 466 aaPredicted RBP11.99□□□□□ -0.49
SRSF4-204ENST00000489898 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 KIAA1161Q6NSJ0 714 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 PRPF39Q86UA1 669 aaKnown RBP11.99□□□□□ -0.49
SRSF4-204ENST00000489898 EID2Q8N6I1 236 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 TP53I13Q8NBR0 393 aaPredicted RBP11.99□□□□□ -0.49
SRSF4-204ENST00000489898 ARHGEF26Q96DR7 871 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 ETNK2Q9NVF9 386 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 HECAQ9UBI9 543 aaPredicted RBP11.99□□□□□ -0.49
SRSF4-204ENST00000489898 FTSJ1Q9UET6 329 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 APOBEC2Q9Y235 224 aaKnown RBP11.99□□□□□ -0.49
SRSF4-204ENST00000489898 GPSM3Q9Y4H4 160 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 PCDHGA1Q9Y5H4 931 aa11.99□□□□□ -0.49
SRSF4-204ENST00000489898 A0A1W2PQJ5 194 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 FGF10O15520 208 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 LZTS3O60299 673 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 BUB1BO60566 1050 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 PIGNO95427 931 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 NME1P15531 152 aaKnown RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 DGKAP23743 735 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 ETFBP38117 255 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 MMP12P39900 470 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 YBEYP58557 167 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 RALGDSQ12967 914 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 EIF2B5Q13144 721 aaKnown RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 ASIC2Q16515 512 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 DPYSL2Q16555 572 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 ARL13BQ3SXY8 428 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 PARP15Q460N3 678 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 INO80DQ53TQ3 878 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 EFHC2Q5JST6 749 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 OR4C6Q8NH72 309 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 FAM71BQ8TC56 605 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 ASB12Q8WXK4 309 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 CENPTQ96BT3 561 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 ECHDC3Q96DC8 303 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 CELF6Q96J87 481 aaKnown RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 LRIG1Q96JA1 1093 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 CCDC114Q96M63 670 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 KLHL32Q96NJ5 620 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 LENG8Q96PV6 779 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 SLC39A8Q9C0K1 460 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 TCEAL2Q9H3H9 227 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 SEPT11Q9NVA2 429 aaKnown RBP11.98□□□□□ -0.49
SRSF4-204ENST00000489898 DKK3Q9UBP4 350 aa11.98□□□□□ -0.49
SRSF4-204ENST00000489898 A0A087X0T9 212 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 SPTY2D1-AS1A0A0U1RR47 76 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
SRSF4-204ENST00000489898 IGLON5A6NGN9 336 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 SIGLEC6O43699 453 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 CREB3O43889 395 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 RFPL3O75679 317 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 FTLP02792 175 aaPredicted RBP11.97□□□□□ -0.49
SRSF4-204ENST00000489898 TPM2P07951 284 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 FAM228BP0C875 321 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 TIMP2P16035 220 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 CR2P20023 1033 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 ACP1P24666 158 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 HTR7P34969 479 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 ARSEP51690 589 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 FANCCQ00597 558 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 MYLK3Q32MK0 819 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 RFX8Q6ZV50 586 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 PELI3Q8N2H9 469 aa11.97□□□□□ -0.49
SRSF4-204ENST00000489898 PGBD5Q8N414 524 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms