RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FZD4Q9ULV1 537 aa7.96□□□□□ -1.13
SSR1-210ENST00000489567 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.96□□□□□ -1.13
SSR1-210ENST00000489567 LAMA1P25391 3075 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 TNRC6BQ9UPQ9 1833 aaKnown RBP7.96□□□□□ -1.14
SSR1-210ENST00000489567 BCLAF3A2AJT9 711 aaKnown RBP7.96□□□□□ -1.14
SSR1-210ENST00000489567 TTC36A6NLP5 189 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 METTL12A8MUP2 240 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 PATE3B3GLJ2 98 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 KCNK1O00180 336 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 IGSF6O95976 241 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 RETP07949 1114 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 ITIH2P19823 946 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 CR2P20023 1033 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 CCNCP24863 283 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 ITGB7P26010 798 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 MMP13P45452 471 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 RWDD2BP57060 319 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 PPP2CBP62714 309 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 PPP2CAP67775 309 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 PPIDQ08752 370 aaKnown RBP7.96□□□□□ -1.14
SSR1-210ENST00000489567 SPEM2Q0P670 501 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 PPP2R5EQ16537 467 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 LRRC73Q5JTD7 316 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 LYSMD4Q5XG99 296 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 TCEAL6Q6IPX3 200 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 PARS2Q7L3T8 475 aaKnown RBP7.96□□□□□ -1.14
SSR1-210ENST00000489567 ZSWIM9Q86XI8 627 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 CAMK1DQ8IU85 385 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 LRRC49Q8IUZ0 686 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 REXO1L1PQ8IX06 675 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 TEX26Q8N6G2 289 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 CCNYQ8ND76 341 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 SREK1Q8WXA9 508 aaKnown RBP7.96□□□□□ -1.14
SSR1-210ENST00000489567 MAML1Q92585 1016 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 RUBCNQ92622 972 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 TCEAL3Q969E4 200 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 BIRC7Q96CA5 298 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 RBM41Q96IZ5 413 aaKnown RBP7.96□□□□□ -1.14
SSR1-210ENST00000489567 LOXL4Q96JB6 756 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 KLHL32Q96NJ5 620 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 MGME1Q9BQP7 344 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 ORAI3Q9BRQ5 295 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 SGK2Q9HBY8 427 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 NCDNQ9UBB6 729 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 SEPT3Q9UH03 358 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 NCKAP1Q9Y2A7 1128 aa7.96□□□□□ -1.14
SSR1-210ENST00000489567 SHROOM3Q8TF72 1996 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 DNAH14Q0VDD8 3507 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 C16orf96A6NNT2 1141 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 MATN3O15232 486 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 SPINT1O43278 529 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 PLRG1O43660 514 aaKnown RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 NRDCO43847 1150 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 IGHV4-34P06331 123 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 CCNB1P14635 433 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZFXP17010 805 aaPredicted RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 MX2P20592 715 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 MPLP40238 635 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ABL2P42684 1182 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 SCNN1BP51168 640 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZBTB17Q13105 803 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 HNRNPDQ14103 355 aaKnown RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 TFDP2Q14188 446 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZNF235Q14590 738 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZNF805Q5CZA5 627 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 SPDYCQ5MJ68 293 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 PLA2G2CQ5R387 149 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 MARC1Q5VT66 337 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 GDPD4Q6W3E5 623 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 BBS12Q6ZW61 710 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ERN2Q76MJ5 926 aaKnown RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 SRLQ86TD4 932 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.95□□□□□ -1.14
SSR1-210ENST00000489567 CNTD1Q8N815 330 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 CADM4Q8NFZ8 388 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 PIGKQ92643 395 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 LRIG1Q96JA1 1093 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 FAM118BQ9BPY3 351 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 HINFPQ9BQA5 517 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 HDAC8Q9BY41 377 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 CEP41Q9BYV8 373 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 CPEB1Q9BZB8 566 aaKnown RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 OSBPL8Q9BZF1 889 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 C10orf88Q9H8K7 445 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 NOD2Q9HC29 1040 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 NT5MQ9NPB1 228 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 EIF2B4Q9UI10 523 aaKnown RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 GGT7Q9UJ14 662 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 GMEB2Q9UKD1 530 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 PILRBQ9UKJ0 227 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ITM2BQ9Y287 266 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 SPAG17Q6Q759 2223 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 OTOGLQ3ZCN5 2332 aa7.95□□□□□ -1.14
SSR1-210ENST00000489567 ZFHX2Q9C0A1 2572 aaPredicted RBP7.95□□□□□ -1.14
SSR1-210ENST00000489567 CEP192Q8TEP8 1941 aa7.94□□□□□ -1.14
SSR1-210ENST00000489567 CFAP54Q96N23 3096 aa7.94□□□□□ -1.14
SSR1-210ENST00000489567 TCRBV7S2A1N4TA0A589 114 aa7.94□□□□□ -1.14
SSR1-210ENST00000489567 USP27XA6NNY8 438 aa7.94□□□□□ -1.14
SSR1-210ENST00000489567 MIF4GDA9UHW6 222 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms